RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 GPR19Q15760 415 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 C18orf21Q32NC0 220 aaPredicted RBP11.1□□□□□ -0.63
PFDN1-201ENST00000261813 PRAMEF13Q5VWM6 474 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 ICE2Q659A1 982 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 TTC19Q6DKK2 380 aaPredicted RBP11.1□□□□□ -0.63
PFDN1-201ENST00000261813 CPLX4Q7Z7G2 160 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 CRLF3Q8IUI8 442 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 AFAP1L2Q8N4X5 818 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 CCNYL1Q8N7R7 359 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 OR6Y1Q8NGX8 325 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 USP7Q93009 1102 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 PHF21BQ96EK2 531 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 MED8Q96G25 268 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 MAGEB10Q96LZ2 347 aaPredicted RBP11.1□□□□□ -0.63
PFDN1-201ENST00000261813 C7orf26Q96N11 449 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 OR4K3Q96R72 315 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 OR6C1Q96RD1 312 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 TMEM79Q9BSE2 394 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 MECRQ9BV79 373 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 DRC3Q9H069 523 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 ILKAPQ9H0C8 392 aaPredicted RBP11.1□□□□□ -0.63
PFDN1-201ENST00000261813 PDE7BQ9NP56 450 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 FBXO8Q9NRD0 319 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 INTS7Q9NVH2 962 aaKnown RBP11.1□□□□□ -0.63
PFDN1-201ENST00000261813 SLC39A1Q9NY26 324 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 FOXJ2Q9P0K8 574 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 PTBP2Q9UKA9 531 aaKnown RBP11.1□□□□□ -0.63
PFDN1-201ENST00000261813 SH2B3Q9UQQ2 575 aa11.1□□□□□ -0.63
PFDN1-201ENST00000261813 FASNP49327 2511 aaKnown RBP11.1□□□□□ -0.63
PFDN1-201ENST00000261813 SLCO1B7G3V0H7 640 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 POLR1CO15160 346 aaPredicted RBP11.09□□□□□ -0.63
PFDN1-201ENST00000261813 TAPBPO15533 448 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 SNNO75324 88 aaPredicted RBP11.09□□□□□ -0.63
PFDN1-201ENST00000261813 KATNA1O75449 491 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 SUPT7LO94864 414 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 FKBP9O95302 570 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 TGDSO95455 350 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 HSPA4LO95757 839 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 CCND1P24385 295 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 RBMS1P29558 406 aaKnown RBP11.09□□□□□ -0.63
PFDN1-201ENST00000261813 CMPK1P30085 196 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 SLC6A12P48065 614 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 ACY1Q03154 408 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 FOXM1Q08050 763 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 BST1Q10588 318 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 TUBB3Q13509 450 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 RCN2Q14257 317 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 DEFB110Q30KQ9 67 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 PTCHD3Q3KNS1 767 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 FBXO48Q5FWF7 155 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 ZNF678Q5SXM1 525 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 THEMIS2Q5TEJ8 643 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 CAPN13Q6MZZ7 669 aaPredicted RBP11.09□□□□□ -0.63
PFDN1-201ENST00000261813 FIGLAQ6QHK4 219 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 KLHDC8AQ8IYD2 350 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 LSMEM2Q8N112 164 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 UBTD2Q8WUN7 234 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 ZNF501Q96CX3 271 aaPredicted RBP11.09□□□□□ -0.63
PFDN1-201ENST00000261813 TCTN2Q96GX1 697 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 ZNF317Q96PQ6 595 aaPredicted RBP11.09□□□□□ -0.63
PFDN1-201ENST00000261813 TAAR9Q96RI9 348 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 SIKE1Q9BRV8 207 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 GATA5Q9BWX5 397 aaPredicted RBP11.09□□□□□ -0.63
PFDN1-201ENST00000261813 CHRNA10Q9GZZ6 450 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 CCDC86Q9H6F5 360 aaKnown RBP11.09□□□□□ -0.63
PFDN1-201ENST00000261813 MRPS30Q9NP92 439 aaKnown RBP11.09□□□□□ -0.63
PFDN1-201ENST00000261813 PFDN4Q9NQP4 134 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 FGF21Q9NSA1 209 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 CUEDC1Q9NWM3 386 aaPredicted RBP11.09□□□□□ -0.63
PFDN1-201ENST00000261813 WWOXQ9NZC7 414 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 ANGPTL3Q9Y5C1 460 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 PCDHGA3Q9Y5H0 932 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 KLK4Q9Y5K2 254 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 B3GALT1Q9Y5Z6 326 aa11.09□□□□□ -0.63
PFDN1-201ENST00000261813 NBEAQ8NFP9 2946 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 OR2A25A4D2G3 310 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 EIF4E1BA6NMX2 242 aaKnown RBP11.08□□□□□ -0.64
PFDN1-201ENST00000261813 EDF1O60869 148 aaKnown RBP11.08□□□□□ -0.64
PFDN1-201ENST00000261813 CTSVO60911 334 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 STK16O75716 305 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 CCNDBP1O95273 360 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 TIAF1O95411 115 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 CTSBP07858 339 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 MSL3P1P0C860 447 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 TROVE2P10155 538 aaKnown RBP eCLIP11.08□□□□□ -0.64
PFDN1-201ENST00000261813 FGF5P12034 268 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 NPPBP16860 134 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 SLC5A2P31639 672 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 GDF5P43026 501 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 ABATP80404 500 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 GABPB1Q06547 395 aaPredicted RBP11.08□□□□□ -0.64
PFDN1-201ENST00000261813 VAC14Q08AM6 782 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 TBC1D25Q3MII6 688 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 TMTC4Q5T4D3 741 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 ZNF425Q6IV72 752 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 C19orf48Q6RUI8 117 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 LCTLQ6UWM7 567 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 CEACAM20Q6UY09 585 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 LRRC70Q7Z2Q7 622 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms