RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 HPDP32754 393 aaPredicted RBP17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 RORAP35398 523 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 MC1RQ01726 317 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 IRF8Q02556 426 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 TLE3Q04726 772 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 GPS2Q13227 327 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 RBBP5Q15291 538 aaKnown RBP17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 FBXO48Q5FWF7 155 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 PRAMEF17Q5VTA0 474 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 ASPGQ86U10 573 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 PLD3Q8IV08 490 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 SLC22A9Q8IVM8 553 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 CYP4X1Q8N118 509 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 PTGR2Q8N8N7 351 aaPredicted RBP17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 TRPV3Q8NET8 790 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 HNRNPLLQ8WVV9 542 aaKnown RBP17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 SLC13A3Q8WWT9 602 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 UBE2E3Q969T4 207 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 CCDC126Q96EE4 140 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 SEC16BQ96JE7 1060 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 PRM3Q9NNZ6 103 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 RRAGDQ9NQL2 400 aaPredicted RBP17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 STARD5Q9NSY2 213 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 TMEM216Q9P0N5 145 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 SENP1Q9P0U3 644 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 MID2Q9UJV3 735 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 PCDHGA4Q9Y5G9 962 aa17.9■□□□□ 0.46
CYSTM1-201ENST00000261811 RGS16O15492 202 aaPredicted RBP17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 MYZAPP0CAP1 466 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 CRHR1P34998 444 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 BCL6P41182 706 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 AGTR2P50052 363 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 SKP1P63208 163 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 REEP5Q00765 189 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 MEF2AQ02078 507 aaPredicted RBP17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 RGS1Q08116 209 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 PWP1Q13610 501 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 NIPAL1Q6NVV3 410 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 PRMT9Q6P2P2 845 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 TMIGD1Q6UXZ0 262 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 SLCO4C1Q6ZQN7 724 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 TEX9Q8N6V9 391 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 SLC38A9Q8NBW4 561 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 ATP6V1E2Q96A05 226 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 PHF21BQ96EK2 531 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 RNF31Q96EP0 1072 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 MVB12AQ96EY5 273 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 SMC6Q96SB8 1091 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 RUFY1Q96T51 708 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 NT5DC2Q9H857 520 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 DHCR7Q9UBM7 475 aaKnown RBP17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 ZFP69BQ9UJL9 534 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 CROTQ9UKG9 612 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 PADI2Q9Y2J8 665 aa17.89■□□□□ 0.45
CYSTM1-201ENST00000261811 ASPMQ8IZT6 3477 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 LOC101059948A0A1B0GTJ6 334 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 ANKDD1BA6NHY2 528 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 SERPIND1P05546 499 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 RAB40ALP0C0E4 278 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 LIFP15018 202 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 EEF1DP29692 281 aaKnown RBP17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 ARL1P40616 181 aaPredicted RBP17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 SCTRP47872 440 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 CHIT1Q13231 466 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 DNASE1L3Q13609 305 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 GTF2H2Q13888 395 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 SLBPQ14493 270 aaKnown RBP eCLIP17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 TBCCQ15814 346 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 PRTGQ2VWP7 1150 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 C1orf189Q5VU69 101 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 GTF2H2CQ6P1K8 395 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 LRIG3Q6UXM1 1119 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 VASH2Q86V25 355 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 TRABD2AQ86V40 505 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 CCDC63Q8NA47 563 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 PPP4R1Q8TF05 950 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 CT55Q8WUE5 264 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 STMN4Q9H169 189 aaPredicted RBP17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 CHST8Q9H2A9 424 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 IFT80Q9P2H3 777 aaPredicted RBP17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 RUVBL1Q9Y265 456 aaKnown RBP17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 SSUH2Q9Y2M2 353 aa17.88■□□□□ 0.45
CYSTM1-201ENST00000261811 GOLGA6L10A6NI86 522 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 NDUFS4O43181 175 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 LCMT2O60294 686 aaKnown RBP17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 UGDHO60701 494 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 CTSBP07858 339 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 ATP5F1P24539 256 aaPredicted RBP17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 VARSP26640 1264 aaKnown RBP17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 ITPKBP27987 946 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 CASP2P42575 452 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 AVPR1BP47901 424 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 NAA20P61599 178 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 SLC18A2Q05940 514 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 VAC14Q08AM6 782 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 FAM53BQ14153 422 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 DOC2AQ14183 400 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 HKDC1Q2TB90 917 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 NKAIN1Q4KMZ8 207 aa17.87■□□□□ 0.45
CYSTM1-201ENST00000261811 CEP85LQ5SZL2 805 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms