RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 TCF7P36402 384 aaPredicted RBP3.93□□□□□ -1.78
CCDC54-201ENST00000261058 IL1RL1Q01638 556 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 RRS1Q15050 365 aaKnown RBP3.93□□□□□ -1.78
CCDC54-201ENST00000261058 TMEM30BQ3MIR4 351 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 GTDC1Q4AE62 458 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 FAM166AQ6J272 317 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 CTR9Q6PD62 1173 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 BTNL8Q6UX41 500 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 ZNF329Q86UD4 541 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 APCDD1Q8J025 514 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 SIX6OS1Q8N1H7 587 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 SPC24Q8NBT2 197 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 KBTBD8Q8NFY9 601 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 OR13C3Q8NGS6 347 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 GIMAP1Q8WWP7 306 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 RBM18Q96H35 190 aaKnown RBP3.93□□□□□ -1.78
CCDC54-201ENST00000261058 GDAP1L1Q96MZ0 367 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 DUX3Q96PT4 197 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 TRIM6Q9C030 488 aaPredicted RBP3.93□□□□□ -1.78
CCDC54-201ENST00000261058 SDCBP2Q9H190 292 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 TMEM181Q9P2C4 612 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 CGNQ9P2M7 1197 aaKnown RBP3.93□□□□□ -1.78
CCDC54-201ENST00000261058 MOSPD1Q9UJG1 213 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 CDH7Q9ULB5 785 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 IL16Q14005 1332 aa3.93□□□□□ -1.78
CCDC54-201ENST00000261058 A0A087X002 238 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 A0A1W2PPW3 197 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 ERICH4A6NGS2 130 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 F8VVB4 439 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 F8VWA3 439 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 DDX39AO00148 427 aaKnown RBP3.92□□□□□ -1.78
CCDC54-201ENST00000261058 FLRT2O43155 660 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 SELENOFO60613 162 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 FMO6PO60774 539 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 LETM1O95202 739 aaPredicted RBP3.92□□□□□ -1.78
CCDC54-201ENST00000261058 GUCA1CO95843 209 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 SERPING1P05155 500 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 TPM3P06753 285 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 CEBPBP17676 345 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 PSMB4P28070 264 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 CHRNB4P30926 498 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 DMTNQ08495 405 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 PTK6Q13882 451 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 NONOQ15233 471 aaKnown RBP eCLIP3.92□□□□□ -1.78
CCDC54-201ENST00000261058 EXT1Q16394 746 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 C2orf76Q3KRA6 126 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 IYDQ6PHW0 289 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 SLC25A47Q6Q0C1 308 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 NHLRC1Q6VVB1 395 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 GPR141Q7Z602 305 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 AMIGO1Q86WK6 493 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 DCLK2Q8N568 766 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 TMCO5AQ8N6Q1 288 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 KLHDC1Q8N7A1 406 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 AMER3Q8N944 861 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 ATAD1Q8NBU5 361 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 OR5AP2Q8NGF4 316 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 FBXO30Q8TB52 745 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 RIT1Q92963 219 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 PRAC1Q96KF2 57 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 LRR1Q96L50 414 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 NDNQ99608 321 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 RBM4Q9BWF3 364 aaKnown RBP3.92□□□□□ -1.78
CCDC54-201ENST00000261058 RNF186Q9NXI6 227 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 EXTL2Q9UBQ6 330 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 SH3BGRL2Q9UJC5 107 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 TNNQ9UQP3 1299 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 CHKBQ9Y259 395 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 KCNK7Q9Y2U2 307 aa3.92□□□□□ -1.78
CCDC54-201ENST00000261058 KIF26BQ2KJY2 2108 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 OOEPA6NGQ2 149 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 PPIP5K2O43314 1243 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 KRT86O43790 486 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 EDIL3O43854 480 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 TRMUO75648 421 aaKnown RBP3.91□□□□□ -1.78
CCDC54-201ENST00000261058 CDC123O75794 336 aaPredicted RBP3.91□□□□□ -1.78
CCDC54-201ENST00000261058 RAF1P04049 648 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 KRT13P13646 458 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 LBPP18428 481 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 ALDH4A1P30038 563 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 MAP2K2P36507 400 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 KCNJ10P78508 379 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 SULT2A1Q06520 285 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 COX10Q12887 443 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 KRT81Q14533 505 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 MORF4L2Q15014 288 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 PPA1Q15181 289 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 RBBP7Q16576 425 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 ANKDD1AQ495B1 522 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 RAB12Q6IQ22 244 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 IRGCQ6NXR0 463 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 CYB5D1Q6P9G0 228 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 KDELC1Q6UW63 502 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 TMEM207Q6UWW9 146 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 CCBE1Q6UXH8 406 aaPredicted RBP3.91□□□□□ -1.78
CCDC54-201ENST00000261058 LEKR1Q6ZMV7 388 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 Q6ZTC4 211 aa3.91□□□□□ -1.78
CCDC54-201ENST00000261058 CPEB2Q7Z5Q1 589 aaKnown RBP3.91□□□□□ -1.78
CCDC54-201ENST00000261058 MTERF4Q7Z6M4 381 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms