RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 C17orf77Q96MU5 243 aa4.47□□□□□ -1.69
TRA2B-201ENST00000259043 LITAFQ99732 161 aa4.47□□□□□ -1.69
TRA2B-201ENST00000259043 RBM4Q9BWF3 364 aaKnown RBP4.47□□□□□ -1.69
TRA2B-201ENST00000259043 PIGMQ9H3S5 423 aa4.47□□□□□ -1.69
TRA2B-201ENST00000259043 KCNK15Q9H427 330 aa4.47□□□□□ -1.69
TRA2B-201ENST00000259043 CHMP1AQ9HD42 196 aaPredicted RBP4.47□□□□□ -1.69
TRA2B-201ENST00000259043 TCP11L1Q9NUJ3 509 aa4.47□□□□□ -1.69
TRA2B-201ENST00000259043 DDX43Q9NXZ2 648 aaKnown RBP4.47□□□□□ -1.69
TRA2B-201ENST00000259043 KLHL9Q9P2J3 617 aa4.47□□□□□ -1.69
TRA2B-201ENST00000259043 WBP11Q9Y2W2 641 aaKnown RBP4.47□□□□□ -1.69
TRA2B-201ENST00000259043 DDX49Q9Y6V7 483 aaKnown RBP4.47□□□□□ -1.69
TRA2B-201ENST00000259043 COL4A6Q14031 1691 aa4.47□□□□□ -1.69
TRA2B-201ENST00000259043 CHD8Q9HCK8 2581 aa4.47□□□□□ -1.69
TRA2B-201ENST00000259043 LCTP09848 1927 aa4.46□□□□□ -1.69
TRA2B-201ENST00000259043 MAP1BP46821 2468 aaKnown RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 SCN10AQ9Y5Y9 1956 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 URADA6NGE7 173 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 EIF4E1BA6NMX2 242 aaKnown RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 RECQL5O94762 991 aaPredicted RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 UBTFL1P0CB47 393 aaPredicted RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 ZNF23P17027 643 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 PTAFRP25105 342 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 GP5P40197 560 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 TNNT3P45378 269 aaPredicted RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 SLC35E4Q6ICL7 350 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 RBPMS2Q6ZRY4 209 aaKnown RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 INTS8Q75QN2 995 aaKnown RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 ERN2Q76MJ5 926 aaKnown RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 LDB1Q86U70 411 aaPredicted RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 IQCHQ86VS3 1027 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 XXYLT1Q8NBI6 393 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 OR10V1Q8NGI7 309 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 OR10S1Q8NGN2 331 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 PHOSPHO2Q8TCD6 241 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 HM13Q8TCT9 377 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 MRPS27Q92552 414 aaKnown RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 FAM162AQ96A26 154 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 JAKMIP1Q96N16 626 aaKnown RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 SMC6Q96SB8 1091 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 CITED2Q99967 270 aaPredicted RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 RIOK1Q9BRS2 568 aaKnown RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 NAA11Q9BSU3 229 aaPredicted RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 SLC25A23Q9BV35 468 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 TFB2MQ9H5Q4 396 aaKnown RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 OPA3Q9H6K4 179 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 VCPKMTQ9H867 229 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 FAM118AQ9NWS6 357 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 LARSQ9P2J5 1176 aaKnown RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 CRNNQ9UBG3 495 aaPredicted RBP4.46□□□□□ -1.7
TRA2B-201ENST00000259043 MYH7P12883 1935 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 ATRXP46100 2492 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 CFAP47Q6ZTR5 3102 aa4.46□□□□□ -1.7
TRA2B-201ENST00000259043 USP24Q9UPU5 2620 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 CEP250Q9BV73 2442 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 ZFHX4Q86UP3 3567 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 EDDM13A0A1B0GTR0 161 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 PRAMEF11O60813 436 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 KCNK5O95279 499 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 BAG4O95429 457 aaKnown RBP4.45□□□□□ -1.7
TRA2B-201ENST00000259043 TRUB2O95900 331 aaKnown RBP4.45□□□□□ -1.7
TRA2B-201ENST00000259043 BCL10O95999 233 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 IQCF3P0C7M6 154 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 UQCRFS1P1P0C7P4 283 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 PATE4P0C8F1 98 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 MUTP22033 750 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 NR2F2P24468 414 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 TUBB4BP68371 445 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 DEFB103AP81534 67 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 CNTN2Q02246 1040 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 FCN2Q15485 313 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 HERC4Q5GLZ8 1057 aaPredicted RBP4.45□□□□□ -1.7
TRA2B-201ENST00000259043 WDR38Q5JTN6 314 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 SLC27A1Q6PCB7 646 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 TPRG1Q6ZUI0 275 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 ARMCX2Q7L311 632 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 ASCL5Q7RTU5 278 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 ADCK2Q7Z695 626 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 CEP97Q8IW35 865 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 TRIM58Q8NG06 486 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 GOT1L1Q8NHS2 421 aaPredicted RBP4.45□□□□□ -1.7
TRA2B-201ENST00000259043 TEKT4Q8WW24 435 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 PHF21AQ96BD5 680 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 LGALS12Q96DT0 336 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 DYNLL2Q96FJ2 89 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 HGH1Q9BTY7 390 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 NUP85Q9BW27 656 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 LRMDAQ9H2I8 198 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 MUTYHQ9UIF7 546 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 TMEM184BQ9Y519 407 aaPredicted RBP4.45□□□□□ -1.7
TRA2B-201ENST00000259043 PCDHGA5Q9Y5G8 931 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 MMP24Q9Y5R2 645 aa4.45□□□□□ -1.7
TRA2B-201ENST00000259043 MYO7AQ13402 2215 aa4.44□□□□□ -1.7
TRA2B-201ENST00000259043 H0Y626 953 aa4.44□□□□□ -1.7
TRA2B-201ENST00000259043 MPHOSPH10O00566 681 aaKnown RBP4.44□□□□□ -1.7
TRA2B-201ENST00000259043 CABYRO75952 493 aa4.44□□□□□ -1.7
TRA2B-201ENST00000259043 INHBAP08476 426 aa4.44□□□□□ -1.7
TRA2B-201ENST00000259043 EEF2P13639 858 aaKnown RBP4.44□□□□□ -1.7
TRA2B-201ENST00000259043 PFKFB1P16118 471 aa4.44□□□□□ -1.7
TRA2B-201ENST00000259043 ATP5DP30049 168 aa4.44□□□□□ -1.7
TRA2B-201ENST00000259043 VCPP55072 806 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms