RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 AIF1LQ9BQI0 150 aa17.81■□□□□ 0.44
UPK3B-201ENST00000257632 CAPS2Q9BXY5 557 aa17.81■□□□□ 0.44
UPK3B-201ENST00000257632 DNAJC11Q9NVH1 559 aa17.81■□□□□ 0.44
UPK3B-201ENST00000257632 CDC14AQ9UNH5 594 aa17.81■□□□□ 0.44
UPK3B-201ENST00000257632 POLHQ9Y253 713 aa17.81■□□□□ 0.44
UPK3B-201ENST00000257632 PTRH2Q9Y3E5 179 aaKnown RBP17.81■□□□□ 0.44
UPK3B-201ENST00000257632 IQANK1A0A1B0GTG1 560 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 TRBC2A0A5B9 178 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 CCDC189A1A4V9 331 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 P2RX6O15547 441 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 PRPF4O43172 522 aaKnown RBP eCLIP17.8■□□□□ 0.44
UPK3B-201ENST00000257632 LCMT2O60294 686 aaKnown RBP17.8■□□□□ 0.44
UPK3B-201ENST00000257632 CCNT2O60583 730 aaKnown RBP17.8■□□□□ 0.44
UPK3B-201ENST00000257632 H2AFYO75367 372 aaKnown RBP17.8■□□□□ 0.44
UPK3B-201ENST00000257632 SLC35G6P0C7Q6 338 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 GGT5P36269 586 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 FOLR3P41439 243 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 MAGEA12P43365 314 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 KCNC1P48547 511 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 UGT8Q16880 541 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 ADGRD1Q6QNK2 874 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 NXPE4Q6UWF7 544 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 VN1R4Q7Z5H5 301 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 DTWD1Q8N5C7 304 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 MFSD9Q8NBP5 474 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 OR4K1Q8NGD4 311 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 RHEBL1Q8TAI7 183 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.8■□□□□ 0.44
UPK3B-201ENST00000257632 SLC13A3Q8WWT9 602 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 FKBP10Q96AY3 582 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 MTBPQ96DY7 904 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 SCYL1Q96KG9 808 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 EPB41L4BQ9H329 900 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 ZNF304Q9HCX3 659 aa17.8■□□□□ 0.44
UPK3B-201ENST00000257632 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.8■□□□□ 0.44
UPK3B-201ENST00000257632 PTBP2Q9UKA9 531 aaKnown RBP17.8■□□□□ 0.44
UPK3B-201ENST00000257632 V9GYY5 206 aaPredicted RBP17.8■□□□□ 0.44
UPK3B-201ENST00000257632 CCDC88CQ9P219 2028 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 CLGNO14967 610 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 ATXN7O15265 892 aaPredicted RBP17.79■□□□□ 0.44
UPK3B-201ENST00000257632 MED26O95402 600 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 SERPIND1P05546 499 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 FURINP09958 794 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 GFAPP14136 432 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 FBLP22087 321 aaKnown RBP17.79■□□□□ 0.44
UPK3B-201ENST00000257632 CXCR2P25025 360 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 GCAP28676 217 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 CCR10P46092 362 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 VSNL1P62760 191 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 REEP5Q00765 189 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 IL10RAQ13651 578 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 RBBP5Q15291 538 aaKnown RBP17.79■□□□□ 0.44
UPK3B-201ENST00000257632 TSNAXIP1Q2TAA8 658 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 FAM69BQ5VUD6 431 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 OVCH1Q7RTY7 1134 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 LRRC70Q7Z2Q7 622 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 MVB12AQ96EY5 273 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 DRC3Q9H069 523 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 SLC22A11Q9NSA0 550 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 GPRC5BQ9NZH0 403 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 PSMC3IPQ9P2W1 217 aaPredicted RBP17.79■□□□□ 0.44
UPK3B-201ENST00000257632 FETUBQ9UGM5 382 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 MAN2B2Q9Y2E5 1009 aa17.79■□□□□ 0.44
UPK3B-201ENST00000257632 NDUFS4O43181 175 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 ZIC2O95409 532 aaPredicted RBP17.78■□□□□ 0.44
UPK3B-201ENST00000257632 ALBP02768 609 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 RBP1P09455 135 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 C1GALT1C1LP0DN25 315 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 COL6A2P12110 1019 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 ITGAXP20702 1163 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 VARSP26640 1264 aaKnown RBP17.78■□□□□ 0.44
UPK3B-201ENST00000257632 AVPR1BP47901 424 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 PDK4Q16654 411 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 MRPL14Q6P1L8 145 aaKnown RBP17.78■□□□□ 0.44
UPK3B-201ENST00000257632 RAB43Q86YS6 212 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 CNPY4Q8N129 248 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 PLD6Q8N2A8 252 aaKnown RBP17.78■□□□□ 0.44
UPK3B-201ENST00000257632 ZNF740Q8NDX6 193 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 ZCCHC10Q8TBK6 192 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 APOBEC4Q8WW27 367 aaKnown RBP17.78■□□□□ 0.44
UPK3B-201ENST00000257632 THAP4Q8WY91 577 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 SLC39A7Q92504 469 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 MMABQ96EY8 250 aaPredicted RBP17.78■□□□□ 0.44
UPK3B-201ENST00000257632 MACROD1Q9BQ69 325 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 SARGQ9BW04 601 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 YIPF2Q9BWQ6 316 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 CD244Q9BZW8 370 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 SPNS1Q9H2V7 528 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 CPSF2Q9P2I0 782 aaKnown RBP17.78■□□□□ 0.44
UPK3B-201ENST00000257632 OPTCQ9UBM4 332 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 TBK1Q9UHD2 729 aa17.78■□□□□ 0.44
UPK3B-201ENST00000257632 A0A0A6YYC8 382 aaPredicted RBP17.77■□□□□ 0.44
UPK3B-201ENST00000257632 I3L1I5 382 aaPredicted RBP17.77■□□□□ 0.44
UPK3B-201ENST00000257632 KLF7O75840 302 aaPredicted RBP17.77■□□□□ 0.44
UPK3B-201ENST00000257632 ONECUT2O95948 504 aa17.77■□□□□ 0.44
UPK3B-201ENST00000257632 OTX2P32243 289 aa17.77■□□□□ 0.44
UPK3B-201ENST00000257632 SCTRP47872 440 aa17.77■□□□□ 0.44
UPK3B-201ENST00000257632 OCA2Q04671 838 aa17.77■□□□□ 0.44
UPK3B-201ENST00000257632 RGS1Q08116 209 aa17.77■□□□□ 0.44
UPK3B-201ENST00000257632 FAM53BQ14153 422 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms