RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 IDH3GP51553 393 aaPredicted RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 PRKXP51817 358 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 NDUFA6P56556 154 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 PSMA6P60900 246 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 RAC1P63000 192 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 PTPN20Q4JDL3 420 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 BCL7AQ4VC05 210 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 COX15Q7KZN9 410 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 LYSMD2Q8IV50 215 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 MFSD9Q8NBP5 474 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 KCTD6Q8NC69 237 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 MOSPD2Q8NHP6 518 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 NPAS1Q99742 590 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 CITED1Q99966 193 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 CNPPD1Q9BV87 410 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF471Q9BX82 626 aaPredicted RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 KCNMB3Q9NPA1 279 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF302Q9NR11 478 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 CNTN3Q9P232 1028 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 DKKL1Q9UK85 242 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 ST3GAL5Q9UNP4 418 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 AAR2Q9Y312 384 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 H0YAE9 185 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 H3BRB1 525 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 HMGB3O15347 200 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC25A17O43808 307 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 SNRPB2P08579 225 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 BMP4P12644 408 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 AOC1P19801 751 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 GCGRP47871 477 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 TAS2R39P59534 338 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 ASAH1Q13510 395 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 BBS12Q6ZW61 710 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 AHSA2Q719I0 299 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 TMPRSS7Q7RTY8 843 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 PROSER1Q86XN7 944 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 SNX29P2Q8IUI4 249 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 PRSS58Q8IYP2 241 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 TMEM132CQ8N3T6 1108 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 STK35Q8TDR2 534 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 KCNJ9Q92806 393 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF778Q96MU6 729 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 MMP28Q9H239 520 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 MTG2Q9H4K7 406 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 IRAK3Q9Y616 596 aa6.57□□□□□ -1.36
PDGFRA-201ENST00000257290 RPS10-NUDT3A0A1W2PQS6 291 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 RCCD1A6NED2 376 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF263O14978 683 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 PIAS2O75928 621 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 LHCGRP22888 699 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 RPS10P46783 165 aaKnown RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 XKP51811 444 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CDC42P60953 191 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 KIAA0141Q14154 515 aaPredicted RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ARHGAP19Q14CB8 494 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ANGEL2Q5VTE6 544 aaKnown RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 RASGRP3Q8IV61 690 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 OR2AP1Q8NGE2 309 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 THAP3Q8WTV1 239 aaPredicted RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ACOT12Q8WYK0 555 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ASB9Q96DX5 294 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 HES6Q96HZ4 224 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 PIWIL1Q96J94 861 aaKnown RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 TEFMQ96QE5 360 aaKnown RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CLN6Q9NWW5 311 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 OR6C2Q9NZP2 312 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CTSFQ9UBX1 484 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 LIMD1Q9UGP4 676 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 DHRS7Q9Y394 339 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 NME7Q9Y5B8 376 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 SNCAIPQ9Y6H5 919 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ANKUB1A6NFN9 424 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 RFPL4AA6NLU0 287 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF729A6NN14 1252 aaPredicted RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 RFPL4AL1F8VTS6 287 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 FAM189A1O60320 539 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 UGT2B17O75795 530 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 GNRH1P01148 92 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 RLN1P04808 185 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 DTYMKP23919 212 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 FMO5P49326 533 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 SRP9P49458 86 aaKnown RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 AP1S1P61966 158 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 RAB30Q15771 203 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 SPDYE2Q495Y8 402 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 TANGO2Q6ICL3 276 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 FBXL19Q6PCT2 694 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ZCCHC23Q6ZST2 131 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 TRAPPC5Q8IUR0 188 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CELF2-AS1Q8N7Q2 184 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 OR2T35Q8NGX2 323 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 TMEM143Q96AN5 459 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ELMOD3Q96FG2 381 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF419Q96HQ0 510 aaPredicted RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 CPXM1Q96SM3 734 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 SUV39H2Q9H5I1 410 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 EXO5Q9H790 373 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 UBE2TQ9NPD8 197 aaPredicted RBP6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 GSN-AS1Q9NRJ2 163 aa6.56□□□□□ -1.36
PDGFRA-201ENST00000257290 SPACA6W5XKT8 324 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms