RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 RIOK2Q9BVS4 552 aaKnown RBP13.05□□□□□ -0.32
VHL-201ENST00000256474 OR51E2Q9H255 320 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 IL1RAPQ9NPH3 570 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 ACOT13Q9NPJ3 140 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 CASP8AP2Q9UKL3 1982 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 M0QX08 132 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 TSPAN6O43657 245 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 SULT1C4O75897 302 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 LIPAP38571 399 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 CTSKP43235 329 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 CRISP3P54108 245 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 MAD2L1BPQ15013 274 aaPredicted RBP13.05□□□□□ -0.32
VHL-201ENST00000256474 TIGD6Q17RP2 521 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 INAVAQ3KP66 663 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 COX20Q5RI15 118 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 TRAF7Q6Q0C0 670 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 THOC6Q86W42 341 aaKnown RBP13.05□□□□□ -0.32
VHL-201ENST00000256474 OR8H2Q8N162 312 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 CIDECQ96AQ7 238 aaPredicted RBP13.05□□□□□ -0.32
VHL-201ENST00000256474 SORBS1Q9BX66 1292 aaKnown RBP13.05□□□□□ -0.32
VHL-201ENST00000256474 VN1R3Q9BXE9 311 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 WDR12Q9GZL7 423 aaKnown RBP13.05□□□□□ -0.32
VHL-201ENST00000256474 TRIT1Q9H3H1 467 aaKnown RBP13.05□□□□□ -0.32
VHL-201ENST00000256474 TMEM184CQ9NVA4 438 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 WDFY3Q8IZQ1 3526 aa13.05□□□□□ -0.32
VHL-201ENST00000256474 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.04□□□□□ -0.32
VHL-201ENST00000256474 WNT9AO14904 365 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 SLC16A8O95907 504 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 JUNBP17275 347 aaPredicted RBP13.04□□□□□ -0.32
VHL-201ENST00000256474 GBX1Q14549 363 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 TPRG1Q6ZUI0 275 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 NCCRP1Q6ZVX7 275 aaPredicted RBP13.04□□□□□ -0.32
VHL-201ENST00000256474 OTOP2Q7RTS6 562 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 TRMT11Q7Z4G4 463 aaKnown RBP13.04□□□□□ -0.32
VHL-201ENST00000256474 TRAPPC5Q8IUR0 188 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 SVOPQ8N4V2 548 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 NFKBIDQ8NI38 313 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 VANGL1Q8TAA9 524 aaPredicted RBP13.04□□□□□ -0.32
VHL-201ENST00000256474 USP7Q93009 1102 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 PKP4Q99569 1192 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 C14orf119Q9NWQ9 140 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 C5AR2Q9P296 337 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 SLC6A14Q9UN76 642 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 FAM32AQ9Y421 112 aaKnown RBP13.04□□□□□ -0.32
VHL-201ENST00000256474 CFAP20Q9Y6A4 193 aaKnown RBP13.04□□□□□ -0.32
VHL-201ENST00000256474 TRIM64A6NGJ6 449 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 SRCP12931 536 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 ATP1B2P14415 290 aaPredicted RBP13.04□□□□□ -0.32
VHL-201ENST00000256474 ITIH1P19827 911 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 PRPS1L1P21108 318 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 PCMT1P22061 227 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 PDHA2P29803 388 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 MXD1Q05195 221 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 ACOX1Q15067 660 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 ZNF605Q86T29 641 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 TMEM25Q86YD3 366 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 ANKRD13BQ86YJ7 626 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 RAVER1Q8IY67 606 aaKnown RBP13.04□□□□□ -0.32
VHL-201ENST00000256474 FAM83FQ8NEG4 500 aaPredicted RBP13.04□□□□□ -0.32
VHL-201ENST00000256474 CAPSLQ8WWF8 208 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 ZNF556Q9HAH1 456 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 TM9SF3Q9HD45 589 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 C11orf16Q9NQ32 467 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 PLAGL1Q9UM63 463 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 GABRR3A8MPY1 467 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 A8MV72 311 aaPredicted RBP13.04□□□□□ -0.32
VHL-201ENST00000256474 KPNA3O00505 521 aaPredicted RBP13.04□□□□□ -0.32
VHL-201ENST00000256474 CCL16O15467 120 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 APOL3O95236 402 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 C6orf47O95873 294 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 INHAP05111 366 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 S100A5P33763 92 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 ILF2Q12905 390 aaKnown RBP13.04□□□□□ -0.32
VHL-201ENST00000256474 ZNF697Q5TEC3 545 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 KLHL17Q6TDP4 642 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 SPATC1Q76KD6 591 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 ZZZ3Q8IYH5 903 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 CMTM7Q96FZ5 175 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 IGSF21Q96ID5 467 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 NRTNQ99748 197 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 TTLL2Q9BWV7 592 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 CCL26Q9Y258 94 aa13.04□□□□□ -0.32
VHL-201ENST00000256474 SYNDIG1LA6NDD5 238 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 TTC36A6NLP5 189 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 SLC22A1O15245 554 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 CCDC159P0C7I6 412 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 SLC35A2P78381 396 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 SMARCB1Q12824 385 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 GAB1Q13480 694 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 AGTRAPQ6RW13 159 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 MACC1Q6ZN28 852 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 MMP21Q8N119 569 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 OR10G2Q8NGC3 310 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 FAM83DQ9H4H8 585 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 H3BN98 237 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 PLK4O00444 970 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 SCAMP1O15126 338 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 CKMT1AP12532 417 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 CD22P20273 847 aa13.03□□□□□ -0.32
VHL-201ENST00000256474 HLA-FP30511 346 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms