RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 NPIPB15A6NHN6 443 aaPredicted RBP18.31■□□□□ 0.52
SNX4-201ENST00000251775 WNT9AO14904 365 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 ZW10O43264 779 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 SOCS5O75159 536 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 CCNDBP1O95273 360 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 MED26O95402 600 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 SPAM1P38567 509 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 HTR3AP46098 478 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 GNPDA1P46926 289 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 CSNK1DP48730 415 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 VLDLRP98155 873 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 ABHD18Q0P651 414 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 NPRL3Q12980 569 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 SLC14A1Q13336 389 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 TBCEQ15813 527 aaPredicted RBP18.31■□□□□ 0.52
SNX4-201ENST00000251775 DEFB115Q30KQ5 88 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.31■□□□□ 0.52
SNX4-201ENST00000251775 NXPE1Q8N323 547 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 ATG16L2Q8NAA4 619 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 VWCEQ96DN2 955 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 SNX18Q96RF0 628 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 HTATIP2Q9BUP3 242 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 CCDC177Q9NQR7 707 aaPredicted RBP18.31■□□□□ 0.52
SNX4-201ENST00000251775 MRPL17Q9NRX2 175 aaKnown RBP18.31■□□□□ 0.52
SNX4-201ENST00000251775 EHD3Q9NZN3 535 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 KIF17Q9P2E2 1029 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 MYOFQ9NZM1 2061 aa18.31■□□□□ 0.52
SNX4-201ENST00000251775 PDZK1P1A8MUH7 402 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 MFN2O95140 757 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 DNTTP04053 509 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 URODP06132 367 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 SLC19A1P41440 591 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 OR2B6P58173 313 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 DEFA1P59665 94 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 DEFA3P59666 94 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 SMU1Q2TAY7 513 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 GAREM2Q75VX8 874 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 ANKRD46Q86W74 232 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 SDHCQ99643 169 aaPredicted RBP18.3■□□□□ 0.52
SNX4-201ENST00000251775 LRTM1Q9HBL6 345 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 CFAP97Q9P2B7 532 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 SAMHD1Q9Y3Z3 626 aaKnown RBP18.3■□□□□ 0.52
SNX4-201ENST00000251775 LOC100506127A0A0U1RQW1 187 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 LOC730098B7Z3J9 87 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 NRG2O14511 850 aaPredicted RBP18.3■□□□□ 0.52
SNX4-201ENST00000251775 SNX4O95219 450 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 IGSF6O95976 241 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 SEMG1P04279 462 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 RPLP0P05388 317 aaKnown RBP18.3■□□□□ 0.52
SNX4-201ENST00000251775 GABRR2P28476 465 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 CDKN2CP42773 168 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 CTSOP43234 321 aaPredicted RBP18.3■□□□□ 0.52
SNX4-201ENST00000251775 LIMK1P53667 647 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 USP39Q53GS9 565 aaKnown RBP18.3■□□□□ 0.52
SNX4-201ENST00000251775 SGO1Q5FBB7 561 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 LYPLAL1Q5VWZ2 237 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 ZNF544Q6NX49 715 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 GALNT10Q86SR1 603 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 UBQLNLQ8IYU4 475 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 C19orf43Q9BQ61 176 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 NUAK2Q9H093 628 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 ABCG8Q9H221 673 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 OR51E2Q9H255 320 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 LSM7Q9UK45 103 aaKnown RBP18.3■□□□□ 0.52
SNX4-201ENST00000251775 MAN2B2Q9Y2E5 1009 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 PCDHGA6Q9Y5G7 932 aa18.3■□□□□ 0.52
SNX4-201ENST00000251775 TNFRSF10AO00220 468 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 SLC28A1O00337 649 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 APOA1P02647 267 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 CKMP06732 381 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 MAPK8P45983 427 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 STK19P49842 368 aaPredicted RBP18.29■□□□□ 0.52
SNX4-201ENST00000251775 RACK1P63244 317 aaKnown RBP18.29■□□□□ 0.52
SNX4-201ENST00000251775 ELP6Q0PNE2 266 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 GPR33Q49SQ1 333 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 FAHD1Q6P587 224 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 CRTC1Q6UUV9 634 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 HORMAD1Q86X24 394 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 RGL4Q8IZJ4 473 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 HS6ST3Q8IZP7 471 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 CBARPQ8N350 705 aaPredicted RBP18.29■□□□□ 0.52
SNX4-201ENST00000251775 TMEM132CQ8N3T6 1108 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 ASCC1Q8N9N2 400 aaKnown RBP18.29■□□□□ 0.52
SNX4-201ENST00000251775 KBTBD8Q8NFY9 601 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 ELMO1Q92556 727 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 DEFB118Q96PH6 123 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 LATS2Q9NRM7 1088 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 ABCB8Q9NUT2 735 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 RAPGEFL1Q9UHV5 662 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 PSORS1C1Q9UIG5 152 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 PEX16Q9Y5Y5 336 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 NOTOA8MTQ0 251 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 C1QCP02747 245 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 FABP3P05413 133 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 BCKDHAP12694 445 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 ETV6P41212 452 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 ARPC4P59998 168 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 NXNL2Q5VZ03 156 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 TMC5Q6UXY8 1006 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 RFLNAQ6ZTI6 216 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms