RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 CPZQ66K79 652 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 PNCKQ6P2M8 343 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 NXPE4Q6UWF7 544 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 HEATR4Q86WZ0 1026 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 PGBD3Q8N328 593 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 COQ8BQ96D53 544 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 RDH12Q96NR8 316 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 PHF12Q96QT6 1004 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 OSBPL10Q9BXB5 764 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 SIRT5Q9NXA8 310 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 USE1Q9NZ43 259 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 PTTG2Q9NZH5 202 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 SAMD4AQ9UPU9 718 aaKnown RBP24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 GNG14A0A1W2PPG7 69 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 EFNA1P20827 205 aaPredicted RBP24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 DRD3P35462 400 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 PPP2R2BQ00005 443 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 MYBPC3Q14896 1274 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 ERICH5Q6P6B1 374 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 PDZD3Q86UT5 571 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 PTOV1Q86YD1 416 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 TMIGD2Q96BF3 282 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 PLA2G2FQ9BZM2 168 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 SPNS1Q9H2V7 528 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 SMURF2Q9HAU4 748 aa24.25■■□□□ 1.47
TMEM55B-201ENST00000250489 PCM1Q15154 2024 aa24.24■■□□□ 1.47
TMEM55B-201ENST00000250489 H3BSA7 217 aa24.24■■□□□ 1.47
TMEM55B-201ENST00000250489 PCCBP05166 539 aa24.24■■□□□ 1.47
TMEM55B-201ENST00000250489 MAGEA2P43356 314 aa24.24■■□□□ 1.47
TMEM55B-201ENST00000250489 LSAMPQ13449 338 aa24.24■■□□□ 1.47
TMEM55B-201ENST00000250489 HIST2H2ACQ16777 129 aaPredicted RBP24.24■■□□□ 1.47
TMEM55B-201ENST00000250489 HIST2H2AA3Q6FI13 130 aa24.24■■□□□ 1.47
TMEM55B-201ENST00000250489 HS3ST5Q8IZT8 346 aa24.24■■□□□ 1.47
TMEM55B-201ENST00000250489 OR10Q1Q8NGQ4 319 aa24.24■■□□□ 1.47
TMEM55B-201ENST00000250489 VCX3AQ9NNX9 186 aa24.24■■□□□ 1.47
TMEM55B-201ENST00000250489 CDH7Q9ULB5 785 aa24.24■■□□□ 1.47
TMEM55B-201ENST00000250489 EXO1Q9UQ84 846 aaKnown RBP24.24■■□□□ 1.47
TMEM55B-201ENST00000250489 ASF1AQ9Y294 204 aa24.24■■□□□ 1.47
TMEM55B-201ENST00000250489 IGLON5A6NGN9 336 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 RPA4Q13156 261 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 PLCL1Q15111 1095 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 LRRC23Q53EV4 343 aaPredicted RBP24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 ANXA8L1Q5VT79 327 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 CWF19L1Q69YN2 538 aaKnown RBP24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 ARMCX6Q7L4S7 300 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 AMZ2Q86W34 360 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 VPS37AQ8NEZ2 397 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 OR5K1Q8NHB7 308 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 SETD7Q8WTS6 366 aaKnown RBP24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 IL17FQ96PD4 163 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 TPT1P8Q9HAU6 139 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 SLC23A2Q9UGH3 650 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 PI15O43692 258 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 DCTP40126 519 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 PBX2P40425 430 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 TAS2R38P59533 333 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 CDK3Q00526 305 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 MEF2AQ02078 507 aaPredicted RBP24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 RBBP5Q15291 538 aaKnown RBP24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 SPESP1Q6UW49 350 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 B3GNT6Q6ZMB0 384 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 COMMD6Q7Z4G1 85 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 TMEM179BQ7Z7N9 219 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 DNAJC5GQ8N7S2 189 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 PJA1Q8NG27 643 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 OR5AR1Q8NGP9 310 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 PNPT1Q8TCS8 783 aaKnown RBP24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 ADAMTS16Q8TE57 1224 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 RAD51AP1Q96B01 352 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 CXorf40BQ96DE9 158 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 MUS81Q96NY9 551 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 YTHDF1Q9BYJ9 559 aaKnown RBP24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 TOR3AQ9H497 397 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 IGFLR1Q9H665 355 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 THEGQ9P2T0 379 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 ATP6V1HQ9UI12 483 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 STON1Q9Y6Q2 735 aa24.23■■□□□ 1.47
TMEM55B-201ENST00000250489 C1orf226A1L170 272 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 ZNF682O95780 498 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 CDH2P19022 906 aaPredicted RBP24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 KELP23276 732 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 EIF2DP41214 584 aaKnown RBP24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 ZNF763Q0D2J5 394 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 PRAMEF14Q5SWL7 426 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 PRAMEF13Q5VWM6 474 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 CACUL1Q86Y37 369 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.22■■□□□ 1.472e-14■■■■■ 67.4
TMEM55B-201ENST00000250489 SNX19Q92543 992 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 RBM4BQ9BQ04 359 aaKnown RBP24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 RBM4Q9BWF3 364 aaKnown RBP24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 LMAN2LQ9H0V9 348 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 PLAGL1Q9UM63 463 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 GMEB1Q9Y692 573 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 MID1O15344 667 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 TGFB1P01137 390 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 SPIDRQ14159 915 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 WSCD2Q2TBF2 565 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 CCNYL2Q5T2Q4 361 aa24.22■■□□□ 1.47
TMEM55B-201ENST00000250489 AGBL4Q5VU57 503 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms