RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 BAHD1Q8TBE0 780 aaPredicted RBP12.41□□□□□ -0.42
LSM8-201ENST00000249299 TUBGCP3Q96CW5 907 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 CMTM7Q96FZ5 175 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 AHCYL2Q96HN2 611 aaKnown RBP12.41□□□□□ -0.42
LSM8-201ENST00000249299 SERPINI1Q99574 410 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 EBF4Q9BQW3 602 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 CENPKQ9BS16 269 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 TUBB6Q9BUF5 446 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 AKTIPQ9H8T0 292 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 SLC6A20Q9NP91 592 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 ENAMQ9NRM1 1142 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 ABCF3Q9NUQ8 709 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 CUEDC1Q9NWM3 386 aaPredicted RBP12.41□□□□□ -0.42
LSM8-201ENST00000249299 C1orf109Q9NX04 203 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 VPS29Q9UBQ0 182 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 ZFP69BQ9UJL9 534 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 FIS1Q9Y3D6 152 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 AP1M2Q9Y6Q5 423 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 PI4KAP42356 2102 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 CABIN1Q9Y6J0 2220 aa12.41□□□□□ -0.42
LSM8-201ENST00000249299 LY6G6EA0A0G2JKS1 128 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 PROB1E7EW31 1015 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 FFAR3O14843 346 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 LSM1O15116 133 aaKnown RBP12.4□□□□□ -0.42
LSM8-201ENST00000249299 GPR42O15529 346 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 C9P02748 559 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 MSL3P1P0C860 447 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 IDO1P14902 403 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 MAPK1P28482 360 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 TSFMP43897 325 aaKnown RBP12.4□□□□□ -0.42
LSM8-201ENST00000249299 HTR6P50406 440 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 PWP1Q13610 501 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 IMPG1Q17R60 797 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 SPIN4Q56A73 249 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 ZC3H12BQ5HYM0 836 aaKnown RBP12.4□□□□□ -0.42
LSM8-201ENST00000249299 C6orf136Q5SQH8 315 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 GALNT18Q6P9A2 607 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 C6orf89Q6UWU4 347 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 THSD4Q6ZMP0 1018 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 TRPM8Q7Z2W7 1104 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 SPRED1Q7Z699 444 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 ZFAND4Q86XD8 727 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 MFSD9Q8NBP5 474 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 SRFBP1Q8NEF9 429 aaKnown RBP12.4□□□□□ -0.42
LSM8-201ENST00000249299 RSC1A1Q92681 617 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 ATOH1Q92858 354 aaPredicted RBP12.4□□□□□ -0.42
LSM8-201ENST00000249299 THOC1Q96FV9 657 aaKnown RBP12.4□□□□□ -0.42
LSM8-201ENST00000249299 TCTN2Q96GX1 697 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 C3orf30Q96M34 536 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 OR52B2Q96RD2 323 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 NRTNQ99748 197 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 ACPTQ9BZG2 426 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 ABCG4Q9H172 646 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 MYLK2Q9H1R3 596 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 WDR55Q9H6Y2 383 aaPredicted RBP12.4□□□□□ -0.42
LSM8-201ENST00000249299 DMRT3Q9NQL9 472 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 FSCN3Q9NQT6 498 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 AHSPQ9NZD4 102 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 PDP2Q9P2J9 529 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 PILRAQ9UKJ1 303 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 WBP11Q9Y2W2 641 aaKnown RBP12.4□□□□□ -0.42
LSM8-201ENST00000249299 U3KQA8 63 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 CUL9Q8IWT3 2517 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 MN1Q10571 1320 aaPredicted RBP12.4□□□□□ -0.42
LSM8-201ENST00000249299 GPR179Q6PRD1 2367 aa12.4□□□□□ -0.42
LSM8-201ENST00000249299 TXNDC9O14530 226 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 UBDO15205 165 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 CAPN5O15484 640 aaPredicted RBP12.39□□□□□ -0.43
LSM8-201ENST00000249299 B4GAT1O43505 415 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 SRPX2O60687 465 aaPredicted RBP12.39□□□□□ -0.43
LSM8-201ENST00000249299 CKMT2P17540 419 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 TYRP1P17643 537 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 CD1CP29017 333 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 GSTM5P46439 218 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 ACADVLP49748 655 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 RBBP5Q15291 538 aaKnown RBP12.39□□□□□ -0.43
LSM8-201ENST00000249299 NR6A1Q15406 480 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 AP5B1Q2VPB7 878 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 TCHHL1Q5QJ38 904 aaPredicted RBP12.39□□□□□ -0.43
LSM8-201ENST00000249299 DEPDC1Q5TB30 811 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 NXNQ6DKJ4 435 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 RNF44Q7L0R7 432 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 PRSS42Q7Z5A4 293 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 ADCK2Q7Z695 626 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 MTDHQ86UE4 582 aaKnown RBP12.39□□□□□ -0.43
LSM8-201ENST00000249299 EID2Q8N6I1 236 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 JPH3Q8WXH2 748 aaPredicted RBP12.39□□□□□ -0.43
LSM8-201ENST00000249299 C11orf24Q96F05 449 aaPredicted RBP12.39□□□□□ -0.43
LSM8-201ENST00000249299 FCRL1Q96LA6 429 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 ZFYVE21Q9BQ24 234 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 LRTM1Q9HBL6 345 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 TMEM9BQ9NQ34 198 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 SEMA4GQ9NTN9 838 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 NOP53Q9NZM5 478 aaKnown RBP12.39□□□□□ -0.43
LSM8-201ENST00000249299 MAPRE3Q9UPY8 281 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 RUVBL1Q9Y265 456 aaKnown RBP12.39□□□□□ -0.43
LSM8-201ENST00000249299 BTRCQ9Y297 605 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 ANKRD12Q6UB98 2062 aa12.39□□□□□ -0.43
LSM8-201ENST00000249299 URADA6NGE7 173 aa12.38□□□□□ -0.43
LSM8-201ENST00000249299 CCT8L1PA6NM43 557 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms