RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CPZQ66K79 652 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 SULT1C3Q6IMI6 304 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 TMEM214Q6NUQ4 689 aaKnown RBP12.15□□□□□ -0.46
VPREB3-201ENST00000248948 PPP1R32Q7Z5V6 425 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 TMPRSS11BQ86T26 416 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 GPSM1Q86YR5 675 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 CNPY4Q8N129 248 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 METTL27Q8N6F8 245 aaPredicted RBP12.15□□□□□ -0.46
VPREB3-201ENST00000248948 EIF1ADQ8N9N8 165 aaKnown RBP12.15□□□□□ -0.46
VPREB3-201ENST00000248948 STAG3L4Q8TBR4 150 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.15□□□□□ -0.46
VPREB3-201ENST00000248948 SLC44A1Q8WWI5 657 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 ISL2Q96A47 359 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 COL26A1Q96A83 441 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 TM4SF19Q96DZ7 209 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 FER1L6-AS2Q96M78 137 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 PAFAH2Q99487 392 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 TMEM79Q9BSE2 394 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 ING2Q9H160 280 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 NMRAL1Q9HBL8 299 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 ACSS2Q9NR19 701 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 SNX15Q9NRS6 342 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 SEMA3GQ9NS98 782 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 WWOXQ9NZC7 414 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 NUDT4Q9NZJ9 180 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 ZNF180Q9UJW8 692 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 RNF112Q9ULX5 631 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 G3BP2Q9UN86 482 aaKnown RBP12.15□□□□□ -0.46
VPREB3-201ENST00000248948 SLC22A14Q9Y267 594 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 MAP4K5Q9Y4K4 846 aa12.15□□□□□ -0.46
VPREB3-201ENST00000248948 TNRC6AQ8NDV7 1962 aaKnown RBP12.15□□□□□ -0.46
VPREB3-201ENST00000248948 A0A087WUV0 522 aaPredicted RBP12.14□□□□□ -0.47
VPREB3-201ENST00000248948 HMX2A2RU54 273 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 B8ZZF3 427 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 PEX12O00623 359 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 PCDH17O14917 1159 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 CEACAM4O75871 244 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 ALDOAP04075 364 aaKnown RBP12.14□□□□□ -0.47
VPREB3-201ENST00000248948 CYC1P08574 325 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 CNTFP26441 200 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 AHRP35869 848 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 OR1D4P47884 311 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 AVPR1BP47901 424 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 SERPINB9P50453 376 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 OCA2Q04671 838 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 NFATC3Q12968 1075 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 CDC16Q13042 620 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 PWP1Q13610 501 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 BMPR2Q13873 1038 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 OR4D1Q15615 310 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 UAP1Q16222 522 aaPredicted RBP12.14□□□□□ -0.47
VPREB3-201ENST00000248948 CATSPEREQ5SY80 951 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 UBAP2Q5T6F2 1119 aaKnown RBP12.14□□□□□ -0.47
VPREB3-201ENST00000248948 MROH9Q5TGP6 573 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 TCTN3Q6NUS6 607 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 NIPAL1Q6NVV3 410 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 TRMT10CQ7L0Y3 403 aaKnown RBP12.14□□□□□ -0.47
VPREB3-201ENST00000248948 LRRC70Q7Z2Q7 622 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 CENPLQ8N0S6 344 aaPredicted RBP12.14□□□□□ -0.47
VPREB3-201ENST00000248948 SPATA6LQ8N4H0 392 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 DTWD1Q8N5C7 304 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 AMER3Q8N944 861 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 RHEBL1Q8TAI7 183 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 UBTD2Q8WUN7 234 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 ABHD17AQ96GS6 310 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 SEC16BQ96JE7 1060 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 VPS50Q96JG6 964 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 TSNARE1Q96NA8 513 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 ATOH8Q96SQ7 321 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 AIF1LQ9BQI0 150 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 CAPS2Q9BXY5 557 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 TRIM55Q9BYV6 548 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 UNKQ9C0B0 810 aaKnown RBP12.14□□□□□ -0.47
VPREB3-201ENST00000248948 TGIF2Q9GZN2 237 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 EHD1Q9H4M9 534 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 MKKSQ9NPJ1 570 aaPredicted RBP12.14□□□□□ -0.47
VPREB3-201ENST00000248948 IGSF5Q9NSI5 407 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 COPG2Q9UBF2 871 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 ZFP69BQ9UJL9 534 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 NFU1Q9UMS0 254 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 ACOT9Q9Y305 439 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 SLC22A7Q9Y694 548 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 IKBKGQ9Y6K9 419 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 MAU2Q9Y6X3 613 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 GCN1Q92616 2671 aaKnown RBP12.14□□□□□ -0.47
VPREB3-201ENST00000248948 CPAMD8Q8IZJ3 1885 aa12.14□□□□□ -0.47
VPREB3-201ENST00000248948 DOCK10Q96BY6 2186 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 FASNP49327 2511 aaKnown RBP12.13□□□□□ -0.47
VPREB3-201ENST00000248948 A0A096LPK6 155 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 FEZF1A0PJY2 475 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 NCF1BA6NI72 391 aaPredicted RBP12.13□□□□□ -0.47
VPREB3-201ENST00000248948 SYCE1LA8MT33 242 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 NCF1CA8MVU1 366 aaPredicted RBP12.13□□□□□ -0.47
VPREB3-201ENST00000248948 AGPSO00116 658 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 NDUFS4O43181 175 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 FOXS1O43638 330 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 DNAJB5O75953 348 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 KRT38O76015 456 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 ZGLP1P0C6A0 271 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 NCF1P14598 390 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms