RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 CRYBA2P53672 197 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 ST8SIA6P61647 398 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 IL5RAQ01344 420 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 SKIV2LQ15477 1246 aaKnown RBP16.74■□□□□ 0.27
LRFN3-201ENST00000246529 ZNF385BQ569K4 471 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 CRTC3Q6UUV7 619 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 XKR5Q6UX68 686 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 C2orf73Q8N5S3 287 aaPredicted RBP16.74■□□□□ 0.27
LRFN3-201ENST00000246529 OR4K1Q8NGD4 311 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 CHTF18Q8WVB6 975 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 ARRDC3Q96B67 414 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 DGCR6LQ9BY27 220 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 SPNS1Q9H2V7 528 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 CDH7Q9ULB5 785 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 FZD4Q9ULV1 537 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 MRPS23Q9Y3D9 190 aaKnown RBP16.74■□□□□ 0.27
LRFN3-201ENST00000246529 MMP20O60882 483 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 SEC14L2O76054 403 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 NPPBP16860 134 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 IDSP22304 550 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 NR4A1P22736 598 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 KIAA0100Q14667 2235 aaKnown RBP16.74■□□□□ 0.27
LRFN3-201ENST00000246529 ZNF658BQ4V348 819 aaPredicted RBP16.74■□□□□ 0.27
LRFN3-201ENST00000246529 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.74■□□□□ 0.27
LRFN3-201ENST00000246529 RAET1GQ6H3X3 334 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 ZNF852Q6ZMS4 543 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 C12orf76Q8N812 135 aaPredicted RBP16.74■□□□□ 0.27
LRFN3-201ENST00000246529 NRTNQ99748 197 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 BRF2Q9HAW0 419 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 PCYT1BQ9Y5K3 369 aaPredicted RBP16.74■□□□□ 0.27
LRFN3-201ENST00000246529 ORC6Q9Y5N6 252 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 KCNE2Q9Y6J6 123 aa16.74■□□□□ 0.27
LRFN3-201ENST00000246529 MGAT4DA6NG13 374 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 SLC1A7O00341 560 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 TLL1O43897 1013 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 PCDH7O60245 1069 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 LILRB5O75023 590 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 SEMG1P04279 462 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 FABP3P05413 133 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 SRPRAP08240 638 aaKnown RBP16.73■□□□□ 0.27
LRFN3-201ENST00000246529 ZNF182P17025 639 aaPredicted RBP16.73■□□□□ 0.27
LRFN3-201ENST00000246529 JUNBP17275 347 aaPredicted RBP16.73■□□□□ 0.27
LRFN3-201ENST00000246529 EPHA2P29317 976 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 MC1RQ01726 317 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 SLBPQ14493 270 aaKnown RBP eCLIP16.73■□□□□ 0.27
LRFN3-201ENST00000246529 DHRS4L2Q6PKH6 230 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 NLRP8Q86W28 1048 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 TUBA1CQ9BQE3 449 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 PDP1Q9P0J1 537 aaPredicted RBP16.73■□□□□ 0.27
LRFN3-201ENST00000246529 C1orf226A1L170 272 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 MAN1A2O60476 641 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 XYLBO75191 536 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 TGFB1P01137 390 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 FSHRP23945 695 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 GJA8P48165 433 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 RAD23AP54725 363 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 BNIP3Q12983 259 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 FNDC3BQ53EP0 1204 aaKnown RBP16.73■□□□□ 0.27
LRFN3-201ENST00000246529 MED27Q6P2C8 311 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 TRMT11Q7Z4G4 463 aaKnown RBP16.73■□□□□ 0.27
LRFN3-201ENST00000246529 ZC3H7AQ8IWR0 971 aaKnown RBP16.73■□□□□ 0.27
LRFN3-201ENST00000246529 NAGSQ8N159 534 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 SYNPOQ8N3V7 929 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 TANKQ92844 425 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 ZNF707Q96C28 371 aaPredicted RBP16.73■□□□□ 0.27
LRFN3-201ENST00000246529 OTUB2Q96DC9 234 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 THAP11Q96EK4 314 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 LRIG1Q96JA1 1093 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 CSF3RQ99062 836 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 CCDC90BQ9GZT6 254 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 OR51B5Q9H339 312 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 TM9SF3Q9HD45 589 aa16.73■□□□□ 0.27
LRFN3-201ENST00000246529 AXIN1O15169 862 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 TIA1P31483 386 aaKnown RBP eCLIP16.72■□□□□ 0.27
LRFN3-201ENST00000246529 FMO3P31513 532 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 CLK3P49761 638 aaKnown RBP16.72■□□□□ 0.27
LRFN3-201ENST00000246529 HNRNPFP52597 415 aaKnown RBP16.72■□□□□ 0.27
LRFN3-201ENST00000246529 PLA2G16P53816 162 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 ZNF33BQ06732 778 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 CDK5R2Q13319 367 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 LAIR1Q6GTX8 287 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 ANGPTL8Q6UXH0 198 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 CBLL1Q75N03 491 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 ARMCX6Q7L4S7 300 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 HORMAD1Q86X24 394 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 ZNF547Q8IVP9 402 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 NPAS3Q8IXF0 933 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 KLHDC8AQ8IYD2 350 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 ZNF740Q8NDX6 193 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 PIK3C3Q8NEB9 887 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 OR4A15Q8NGL6 344 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 B4GALNT2Q8NHY0 566 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 WDR48Q8TAF3 677 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 BADQ92934 168 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 IL17FQ96PD4 163 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 RAPGEFL1Q9UHV5 662 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 RPS6KA6Q9UK32 745 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 PLAGL1Q9UM63 463 aa16.72■□□□□ 0.27
LRFN3-201ENST00000246529 SAMHD1Q9Y3Z3 626 aaKnown RBP16.72■□□□□ 0.27
LRFN3-201ENST00000246529 SLC16A6O15403 523 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms