RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 SPATA6Q9NWH7 488 aaPredicted RBP13.9□□□□□ -0.18
HIF3A-202ENST00000244303 TRNAU1APQ9NX07 287 aaKnown RBP13.9□□□□□ -0.18
HIF3A-202ENST00000244303 KIF17Q9P2E2 1029 aa13.9□□□□□ -0.18
HIF3A-202ENST00000244303 ERVW-1Q9UQF0 538 aa13.9□□□□□ -0.18
HIF3A-202ENST00000244303 CXorf51AA0A1B0GTR3 108 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 NEDD8-MDP1E9PL57 170 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 JRKO75564 520 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 SERPINB7O75635 380 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 SULT1C4O75897 302 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 GABARAPO95166 117 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 ETHE1O95571 254 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 NUDT7P0C024 238 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 IDUAP35475 653 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 POLR2LP62875 67 aaKnown RBP13.89□□□□□ -0.19
HIF3A-202ENST00000244303 CCSMST1Q4G0I0 132 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 NIPAL1Q6NVV3 410 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 CCDC81Q6ZN84 652 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 Q6ZVL8 140 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 RASGRP3Q8IV61 690 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 CHPT1Q8WUD6 406 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 TPD52L3Q96J77 140 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 APOL4Q9BPW4 351 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 DUSP26Q9BV47 211 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 CEP44Q9C0F1 390 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 TPT1P8Q9HAU6 139 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 KRT84Q9NSB2 600 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 HCFC1R1Q9NWW0 138 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 SCN3BQ9NY72 215 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 VPS4AQ9UN37 437 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 ERGIC3Q9Y282 383 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 WDR37Q9Y2I8 494 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 PCDHB11Q9Y5F2 797 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 HSPE1-MOB4S4R3N1 261 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 PDE4DIPQ5VU43 2346 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 A0A1W2PQ67 120 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 KIAA0355O15063 1070 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 SCAMP2O15127 329 aaKnown RBP13.89□□□□□ -0.19
HIF3A-202ENST00000244303 SLCO2B1O94956 709 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 ETV3P41162 512 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 MASP1P48740 699 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 ITGA1P56199 1179 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 NAE1Q13564 534 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 KCNC3Q14003 757 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 SYNPOQ8N3V7 929 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 TMCO5AQ8N6Q1 288 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 ATG16L2Q8NAA4 619 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 ZNF540Q8NDQ6 660 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 OR2A12Q8NGT7 310 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 C11orf24Q96F05 449 aaPredicted RBP13.89□□□□□ -0.19
HIF3A-202ENST00000244303 SH3YL1Q96HL8 342 aaPredicted RBP13.89□□□□□ -0.19
HIF3A-202ENST00000244303 ASPSCR1Q9BZE9 553 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 REEP1Q9H902 201 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 SIRT5Q9NXA8 310 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 THUMPD1Q9NXG2 353 aaKnown RBP13.89□□□□□ -0.19
HIF3A-202ENST00000244303 NDRG4Q9ULP0 352 aaKnown RBP13.89□□□□□ -0.19
HIF3A-202ENST00000244303 FZD4Q9ULV1 537 aa13.89□□□□□ -0.19
HIF3A-202ENST00000244303 PRRC2BQ5JSZ5 2229 aaKnown RBP13.88□□□□□ -0.19
HIF3A-202ENST00000244303 ZBBXA8MT70 800 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 FADS2P1A8MWK0 482 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 TOR1BO14657 336 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 PSIP1O75475 530 aaKnown RBP13.88□□□□□ -0.19
HIF3A-202ENST00000244303 ACVR2AP27037 513 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 ALDH4A1P30038 563 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 CXCR4P61073 352 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 LSM3P62310 102 aaKnown RBP13.88□□□□□ -0.19
HIF3A-202ENST00000244303 RAE1P78406 368 aaKnown RBP13.88□□□□□ -0.19
HIF3A-202ENST00000244303 ZNF33BQ06732 778 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 MAD2L1BPQ15013 274 aaPredicted RBP13.88□□□□□ -0.19
HIF3A-202ENST00000244303 GRHL2Q6ISB3 625 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 AGTRAPQ6RW13 159 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 BTLAQ7Z6A9 289 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 SLCO6A1Q86UG4 719 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 LILRA3Q8N6C8 439 aaPredicted RBP13.88□□□□□ -0.19
HIF3A-202ENST00000244303 C1orf52Q8N6N3 182 aaKnown RBP13.88□□□□□ -0.19
HIF3A-202ENST00000244303 CLP1Q92989 425 aaKnown RBP13.88□□□□□ -0.19
HIF3A-202ENST00000244303 OR4K3Q96R72 315 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 ZNF347Q96SE7 839 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 SGK2Q9HBY8 427 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 RASSF1Q9NS23 344 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 STOX2Q9P2F5 926 aaPredicted RBP13.88□□□□□ -0.19
HIF3A-202ENST00000244303 SOBPA7XYQ1 873 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 GABRR3A8MPY1 467 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 MYO1DO94832 1006 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 FADS2O95864 444 aaKnown RBP13.88□□□□□ -0.19
HIF3A-202ENST00000244303 MT-ND2P03891 347 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 PABPC1P11940 636 aaKnown RBP13.88□□□□□ -0.19
HIF3A-202ENST00000244303 ZNF30P17039 623 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 FUT4P22083 530 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 VIPR1P32241 457 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 BDKRB1P46663 353 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 PREPP48147 710 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 CRYBA2P53672 197 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 C21orf58P58505 322 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 ERVFC1P60507 584 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 VEZF1Q14119 521 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 DGCR6Q14129 220 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 HKDC1Q2TB90 917 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 TRIM16LQ309B1 348 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 ADPRMQ3LIE5 342 aa13.88□□□□□ -0.19
HIF3A-202ENST00000244303 KIAA1614Q5VZ46 1190 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms