RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 C3orf18Q9UK00 162 aa12.12□□□□□ -0.47
PDZD11-201ENST00000239666 FBXL4Q9UKA2 621 aa12.12□□□□□ -0.47
PDZD11-201ENST00000239666 RUVBL2Q9Y230 463 aaKnown RBP12.12□□□□□ -0.47
PDZD11-201ENST00000239666 HS3ST3B1Q9Y662 390 aa12.12□□□□□ -0.47
PDZD11-201ENST00000239666 LOC105369274A0A096LPK9 316 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 LOC102723532A0A0G2JNH3 316 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 A0A1W2PQ72 361 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 DYTNA2CJ06 578 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 URADA6NGE7 173 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 SOCS6O14544 535 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 UQCRHP07919 91 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 SLC35G6P0C7Q6 338 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 MCM3P25205 808 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 SLC26A3P40879 764 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 DR1Q01658 176 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 ATG9BQ674R7 924 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 DUPD1Q68J44 220 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 FAM45BPQ6NSW5 357 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 RPUSD3Q6P087 351 aaKnown RBP12.11□□□□□ -0.47
PDZD11-201ENST00000239666 CPNE9Q8IYJ1 553 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 ALDH16A1Q8IZ83 802 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 OR4N4Q8N0Y3 316 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 OR11G2Q8NGC1 345 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 DNAJB14Q8TBM8 379 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 FAM45AQ8TCE6 357 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 PDLIM5Q96HC4 596 aaKnown RBP12.11□□□□□ -0.47
PDZD11-201ENST00000239666 VPS39Q96JC1 886 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 PHACTR1Q9C0D0 580 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 SOX17Q9H6I2 414 aaPredicted RBP12.11□□□□□ -0.47
PDZD11-201ENST00000239666 CLK4Q9HAZ1 481 aaKnown RBP12.11□□□□□ -0.47
PDZD11-201ENST00000239666 RUVBL1Q9Y265 456 aaKnown RBP12.11□□□□□ -0.47
PDZD11-201ENST00000239666 VWA7Q9Y334 891 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 MAU2Q9Y6X3 613 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 ESPL1Q14674 2120 aa12.11□□□□□ -0.47
PDZD11-201ENST00000239666 MDC1Q14676 2089 aaKnown RBP12.1□□□□□ -0.47
PDZD11-201ENST00000239666 CNOT3O75175 753 aaKnown RBP12.1□□□□□ -0.47
PDZD11-201ENST00000239666 WFS1O76024 890 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 NSA2O95478 260 aaKnown RBP12.1□□□□□ -0.47
PDZD11-201ENST00000239666 IMPA1P29218 277 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 HPDP32754 393 aaPredicted RBP12.1□□□□□ -0.47
PDZD11-201ENST00000239666 TSFMP43897 325 aaKnown RBP12.1□□□□□ -0.47
PDZD11-201ENST00000239666 GLRBP48167 497 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 AGTR2P50052 363 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 GNG11P61952 73 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 MEF2AQ02078 507 aaPredicted RBP12.1□□□□□ -0.47
PDZD11-201ENST00000239666 CUL1Q13616 776 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 INAQ16352 499 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 HIF1AQ16665 826 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 PLEKHN1Q494U1 663 aaPredicted RBP12.1□□□□□ -0.47
PDZD11-201ENST00000239666 FAM69BQ5VUD6 431 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 ZNF549Q6P9A3 640 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 LCTLQ6UWM7 567 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 COX15Q7KZN9 410 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 MAATS1Q7Z4T9 603 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 NKAPQ8N5F7 415 aaKnown RBP12.1□□□□□ -0.47
PDZD11-201ENST00000239666 SUN3Q8TAQ9 357 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 SSC4DQ8WTU2 575 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 EEF1AKMT1Q8WVE0 214 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 THOC3Q96J01 351 aaKnown RBP12.1□□□□□ -0.47
PDZD11-201ENST00000239666 NAPGQ99747 312 aaPredicted RBP12.1□□□□□ -0.47
PDZD11-201ENST00000239666 TUBB6Q9BUF5 446 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 DDX47Q9H0S4 455 aaKnown RBP12.1□□□□□ -0.47
PDZD11-201ENST00000239666 ANKHQ9HCJ1 492 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 ZFATQ9P243 1243 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 GALPQ9UBC7 116 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 CTSFQ9UBX1 484 aa12.1□□□□□ -0.47
PDZD11-201ENST00000239666 MRPS2Q9Y399 296 aaKnown RBP12.1□□□□□ -0.47
PDZD11-201ENST00000239666 IDSB3KWA1 339 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 H7BY64 318 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 BMP10O95393 424 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 AHSGP02765 367 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 SERPINA7P05543 415 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 CTSBP07858 339 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 HNMTP50135 292 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 CCR8P51685 355 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 MFAP5Q13361 173 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 PWP1Q13610 501 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 RAPSNQ13702 412 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 ZNF169Q14929 603 aaPredicted RBP12.09□□□□□ -0.47
PDZD11-201ENST00000239666 HERC3Q15034 1050 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 BBS9Q3SYG4 887 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 AGTRAPQ6RW13 159 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 SLC26A11Q86WA9 606 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 LRRC56Q8IYG6 542 aaPredicted RBP12.09□□□□□ -0.47
PDZD11-201ENST00000239666 CDKL2Q92772 493 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 SNRNP40Q96DI7 357 aaKnown RBP12.09□□□□□ -0.47
PDZD11-201ENST00000239666 SNF8Q96H20 258 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 PRAP1Q96NZ9 151 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 CAPS2Q9BXY5 557 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 NEUROD4Q9HD90 331 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 TRMT1Q9NXH9 659 aaKnown RBP12.09□□□□□ -0.47
PDZD11-201ENST00000239666 ARL15Q9NXU5 204 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 STOX2Q9P2F5 926 aaPredicted RBP12.09□□□□□ -0.47
PDZD11-201ENST00000239666 PDE10AQ9Y233 779 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 MED16Q9Y2X0 877 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 SLC22A7Q9Y694 548 aa12.09□□□□□ -0.47
PDZD11-201ENST00000239666 FLNCQ14315 2725 aa12.08□□□□□ -0.48
PDZD11-201ENST00000239666 SYNDIG1LA6NDD5 238 aa12.08□□□□□ -0.48
PDZD11-201ENST00000239666 GNLYP22749 145 aa12.08□□□□□ -0.48
PDZD11-201ENST00000239666 SLC12A2P55011 1212 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms