RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 EDEM1Q92611 657 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 PROX1Q92786 737 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 NSUN5Q96P11 429 aaKnown RBP6.11□□□□□ -1.43
SGIP1-201ENST00000237247 HHIPQ96QV1 700 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 GTPBP2Q9BX10 602 aaKnown RBP6.11□□□□□ -1.43
SGIP1-201ENST00000237247 ABHD16BQ9H3Z7 469 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 FLRT1Q9NZU1 646 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 RPS6KA6Q9UK32 745 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 Q9Y3F1 56 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 PTGDR2Q9Y5Y4 395 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 FAM170BA6NMN3 283 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 SUPT3HB4E1H0 165 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 CRCPO75575 148 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 SLC22A5O76082 557 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 RECQL5O94762 991 aaPredicted RBP6.11□□□□□ -1.43
SGIP1-201ENST00000237247 ZNF250P15622 560 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 PRPH2P23942 346 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 EEF1B2P24534 225 aaKnown RBP6.11□□□□□ -1.43
SGIP1-201ENST00000237247 DCTP40126 519 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 YAP1P46937 504 aaKnown RBP6.11□□□□□ -1.43
SGIP1-201ENST00000237247 RAB13P51153 203 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 DUSP4Q13115 394 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 CDK5R2Q13319 367 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 TTLL9Q3SXZ7 439 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 TEX30Q5JUR7 227 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 CATSPEREQ5SY80 951 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 KDM4DQ6B0I6 523 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 Q6ZSR9 355 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 UTS2BQ765I0 119 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 METTL23Q86XA0 190 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 CELF2-AS1Q8N7Q2 184 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 TMEM40Q8WWA1 233 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 AKAP1Q92667 903 aaKnown RBP eCLIP6.11□□□□□ -1.43
SGIP1-201ENST00000237247 KCNA7Q96RP8 456 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 SERINC2Q96SA4 455 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 UCK2Q9BZX2 261 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 POLR1EQ9GZS1 481 aaKnown RBP6.11□□□□□ -1.43
SGIP1-201ENST00000237247 FAM49AQ9H0Q0 323 aaPredicted RBP6.11□□□□□ -1.43
SGIP1-201ENST00000237247 SPNS1Q9H2V7 528 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 MMP27Q9H306 513 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 AGO3Q9H9G7 860 aaKnown RBP6.11□□□□□ -1.43
SGIP1-201ENST00000237247 SCML2Q9UQR0 700 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 ENTPD4Q9Y227 616 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 ASB4Q9Y574 426 aa6.11□□□□□ -1.43
SGIP1-201ENST00000237247 TFECO14948 347 aaPredicted RBP6.1□□□□□ -1.43
SGIP1-201ENST00000237247 HOXA2O43364 376 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 PRAMEF11O60813 436 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 TSC22D2O75157 780 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 UGT2B17O75795 530 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 PAPLNO95428 1278 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 TGM6O95932 706 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 IGLV3-27P01718 113 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 C1QBP02746 253 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 ARFIP1P53367 373 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 UGT2B15P54855 530 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 DEFA1P59665 94 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 DEFA3P59666 94 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 SERINC3Q13530 473 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 EFR3AQ14156 821 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 IHHQ14623 411 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 KCNAB1Q14722 419 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 TAF1AQ15573 450 aaPredicted RBP6.1□□□□□ -1.43
SGIP1-201ENST00000237247 UPP1Q16831 310 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 PAGE2BQ5JRK9 111 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 KDELC2Q7Z4H8 507 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 SCD5Q86SK9 330 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 GALNT10Q86SR1 603 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 RBM23Q86U06 439 aaKnown RBP6.1□□□□□ -1.43
SGIP1-201ENST00000237247 ZBTB46Q86UZ6 589 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 RBFAQ8N0V3 343 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.1□□□□□ -1.43
SGIP1-201ENST00000237247 OR2T12Q8NG77 320 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 OR52K2Q8NGK3 314 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 PPP1R13LQ8WUF5 828 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 SLC13A3Q8WWT9 602 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 DEDD2Q8WXF8 326 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 KCNJ9Q92806 393 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 TMEM74Q96NL1 305 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 MGME1Q9BQP7 344 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 ACTR8Q9H981 624 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 PLCXD1Q9NUJ7 323 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 KLK14Q9P0G3 267 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 TEKT2Q9UIF3 430 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 SPATA2Q9UM82 520 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 CHD7Q9P2D1 2997 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 MTCL1Q9Y4B5 1905 aaKnown RBP6.1□□□□□ -1.43
SGIP1-201ENST00000237247 AGAP5A6NIR3 686 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 A8MUA0 341 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 LOC110117498-PIK3R3F6TDL0 507 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 SLC28A1O00337 649 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 PPP6CO00743 305 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 WNT9AO14904 365 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 HRO43593 1189 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 EIF1BO60739 113 aaKnown RBP6.1□□□□□ -1.43
SGIP1-201ENST00000237247 NIPSNAP2O75323 286 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 ERN1O75460 977 aaKnown RBP6.1□□□□□ -1.43
SGIP1-201ENST00000237247 ZNF865P0CJ78 1059 aaPredicted RBP6.1□□□□□ -1.43
SGIP1-201ENST00000237247 IL7RP16871 459 aa6.1□□□□□ -1.43
SGIP1-201ENST00000237247 POU3F3P20264 500 aaPredicted RBP6.1□□□□□ -1.43
SGIP1-201ENST00000237247 CD6P30203 668 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms