RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SIRT5Q9NXA8 310 aa13.72□□□□□ -0.21
PCDHB3-201ENST00000231130 OTCP00480 354 aa13.72□□□□□ -0.21
PCDHB3-201ENST00000231130 OPN1SWP03999 348 aa13.72□□□□□ -0.21
PCDHB3-201ENST00000231130 RFX4Q33E94 735 aa13.72□□□□□ -0.21
PCDHB3-201ENST00000231130 RUNDC3AQ59EK9 446 aa13.72□□□□□ -0.21
PCDHB3-201ENST00000231130 FAM151BQ6UXP7 276 aa13.72□□□□□ -0.21
PCDHB3-201ENST00000231130 CCDC71Q8IV32 467 aaPredicted RBP13.72□□□□□ -0.21
PCDHB3-201ENST00000231130 AADATQ8N5Z0 425 aa13.72□□□□□ -0.21
PCDHB3-201ENST00000231130 BOCQ9BWV1 1114 aa13.72□□□□□ -0.21
PCDHB3-201ENST00000231130 FAM83DQ9H4H8 585 aa13.72□□□□□ -0.21
PCDHB3-201ENST00000231130 REEP1Q9H902 201 aa13.72□□□□□ -0.21
PCDHB3-201ENST00000231130 SLC23A1Q9UHI7 598 aa13.72□□□□□ -0.21
PCDHB3-201ENST00000231130 TSC2P49815 1807 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 BCKDHAP12694 445 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 POU1F1P28069 291 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 PSEN2P49810 448 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 SUOXP51687 545 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 KCNQ1P51787 676 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 CRYBB1P53674 252 aaPredicted RBP13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 DSTNP60981 165 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 HSPA14Q0VDF9 509 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 GALEQ14376 348 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 BAK1Q16611 211 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 UPP1Q16831 310 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 FLYWCH1Q4VC44 716 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 CLVS2Q5SYC1 327 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 FAM171A1Q5VUB5 890 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 C16orf59Q7L2K0 433 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 CYP4Z2PQ8N1L4 340 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 LILRB1Q8NHL6 650 aaPredicted RBP13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 SPPL2AQ8TCT8 520 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 APOLD1Q96LR9 279 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 OR2A14Q96R47 310 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 CNPPD1Q9BV87 410 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 RAD18Q9NS91 495 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 MARCH2Q9P0N8 246 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 PLXNA1Q9UIW2 1896 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 KIAA0513O60268 411 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 HOXC13P31276 330 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 SSTR4P31391 388 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 RPS24P62847 133 aaKnown RBP13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 CDC42EP1Q00587 391 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 RUNX1T1Q06455 604 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 SCN1BQ07699 218 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 SMARCB1Q12824 385 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 SERINC3Q13530 473 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 GPR149Q86SP6 731 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 TMEM132CQ8N3T6 1108 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 ZFAND1Q8TCF1 268 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 SH3KBP1Q96B97 665 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 ERVMER34-1Q9H9K5 563 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 ABCB8Q9NUT2 735 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 THUMPD1Q9NXG2 353 aaKnown RBP13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 ING3Q9NXR8 418 aa13.71□□□□□ -0.21
PCDHB3-201ENST00000231130 TEX51A0A1B0GUA7 166 aa13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 CXCL11O14625 94 aa13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 FCER2P06734 321 aa13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 HOXB8P17481 243 aaPredicted RBP13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 TGFBR2P37173 567 aa13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 PPP3CCP48454 512 aa13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 ZNF767PQ75MW2 155 aa13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 SELENOMQ8WWX9 145 aa13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 MAL2Q969L2 176 aa13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 COQ8BQ96D53 544 aa13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 PANX1Q96RD7 426 aa13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 SLC35C2Q9NQQ7 365 aa13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 SNTG1Q9NSN8 517 aa13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 MRPS7Q9Y2R9 242 aaKnown RBP13.71□□□□□ -0.22
PCDHB3-201ENST00000231130 PDCD11Q14690 1871 aaKnown RBP13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 C17orf102A2RUQ5 167 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 SHOXO15266 292 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 FABP3P05413 133 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 ADORA3P0DMS8 318 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 LPOP22079 712 aaPredicted RBP13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 CFL1P23528 166 aaKnown RBP13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 EVI2BP34910 448 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 TIE1P35590 1138 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 NPRL3Q12980 569 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 KIAA1614Q5VZ46 1190 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 AFMIDQ63HM1 303 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 SHQ1Q6PI26 577 aaKnown RBP13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 FBXO32Q969P5 355 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 UQCC2Q9BRT2 126 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 GPR63Q9BZJ6 419 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 SLC22A4Q9H015 551 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 ABHD16BQ9H3Z7 469 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 CCNB1IP1Q9NPC3 277 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 NLE1Q9NVX2 485 aaPredicted RBP13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 OR2A25A4D2G3 310 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 BNIP3LO60238 219 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 WBP4O75554 376 aaKnown RBP13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 SLC10A3P09131 477 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 INPP1P49441 399 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 IL10RBQ08334 325 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 CAMK2GQ13555 558 aaPredicted RBP13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 PYDC2Q56P42 97 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 IGSF11Q5DX21 431 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 GLCCI1Q86VQ1 547 aa13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 SLC44A2Q8IWA5 706 aaPredicted RBP13.7□□□□□ -0.22
PCDHB3-201ENST00000231130 ZBTB44Q8NCP5 570 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms