RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 LHX3Q9UBR4 397 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 KCNN3Q9UGI6 736 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 ABCG2Q9UNQ0 655 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 OR6C75A6NL08 312 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 IFRD1O00458 451 aaPredicted RBP9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 CLDN7O95471 211 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 GLUD1P00367 558 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 SLC11A1P49279 550 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 GZMMP51124 257 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 MAPK12P53778 367 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 CAP1Q01518 475 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 GPR149Q86SP6 731 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 CARNMT1Q8N4J0 409 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 OR5K1Q8NHB7 308 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 WFDC5Q8TCV5 224 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 FAM120BQ96EK7 910 aaKnown RBP9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 FAM126AQ9BYI3 521 aaPredicted RBP9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 LATS2Q9NRM7 1088 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 GPRC5BQ9NZH0 403 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 AFF4Q9UHB7 1163 aaKnown RBP9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 C3orf18Q9UK00 162 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 VPS4AQ9UN37 437 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 TET1Q8NFU7 2136 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 A0A1B0GVM2 712 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 SMIM30A4D0T7 59 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 C2orf78A6NCI8 922 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF840PA6NDX5 716 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 MANBAO00462 879 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 BCKDKO14874 412 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 RGS13O14921 159 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 PER2O15055 1255 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 AKR7A2O43488 359 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 SMAD6O43541 496 aaKnown RBP9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 SCO2O43819 266 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 FZD6O60353 706 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 NBNO60934 754 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 SCELO95171 688 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF682O95780 498 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 SLC15A1P46059 708 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 CCT3P49368 545 aaKnown RBP9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 RHOAP61586 193 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 ADHFE1Q8IWW8 467 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 SDR16C5Q8N3Y7 309 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 SVOPLQ8N434 492 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 ESX1Q8N693 406 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 RDH12Q96NR8 316 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 TSEN34Q9BSV6 310 aaKnown RBP9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 ACPTQ9BZG2 426 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 IL26Q9NPH9 171 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 OARD1Q9Y530 152 aa9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 PRRC2BQ5JSZ5 2229 aaKnown RBP9.11□□□□□ -0.95
HLA-DOA-201ENST00000229829 PDYNP01213 254 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 IL6P05231 212 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 YES1P07947 543 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 CHRM5P08912 532 aaPredicted RBP9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 ELNP15502 786 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF7P17097 686 aaPredicted RBP9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 EPORP19235 508 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 PTPN6P29350 595 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 RRM2P31350 389 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 NRIP1P48552 1158 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 AKR1D1P51857 326 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 FAM189BP81408 668 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 GBX1Q14549 363 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 CLCA4Q14CN2 919 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZMYND11Q15326 602 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 BTBD16Q32M84 506 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 FAM26DQ5JW98 314 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 CACHD1Q5VU97 1274 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 FUT10Q6P4F1 479 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 PAMR1Q6UXH9 720 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 C16orf62Q7Z3J2 963 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 PARP16Q8N5Y8 322 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 AADATQ8N5Z0 425 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 AMER2Q8N7J2 671 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 TOR1AIP2Q8NFQ8 470 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 BCL7CQ8WUZ0 217 aaPredicted RBP9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 PIH1D2Q8WWB5 315 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 PYCR2Q96C36 320 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 ULK4Q96C45 1275 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 TMEM39AQ9NV64 488 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 MBD1Q9UIS9 605 aaPredicted RBP9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 PPT2Q9UMR5 302 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 GOLGA4Q13439 2230 aaKnown RBP9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 SLC34A2O95436 690 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 GRK3P35626 688 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 DAPP51397 102 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 NFATC2Q13469 925 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 MFSD14CQ5VZR4 134 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 CPZQ66K79 652 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 TRIM46Q7Z4K8 759 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 B3GNT8Q7Z7M8 397 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 IFNL1Q8IU54 200 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 PLPP6Q8IY26 295 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 TIGD4Q8IY51 512 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 STK40Q8N2I9 435 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 PAF1Q8N7H5 531 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 OR6F1Q8NGZ6 308 aa9.1□□□□□ -0.95
HLA-DOA-201ENST00000229829 PYURFQ96I23 114 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms