RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CPOXP36551 454 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 CEBPGP53567 150 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 CDK6Q00534 326 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 SLC35G5Q96KT7 338 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 CAMK1GQ96NX5 476 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 OSBPL2Q9H1P3 480 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 FAM120CQ9NX05 1096 aaKnown RBP13.41□□□□□ -0.26
HCFC2-201ENST00000229330 SLC39A1Q9NY26 324 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 TAS2R3Q9NYW6 316 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 SOX14O95416 240 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 ANKRD54Q6NXT1 300 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 TMEM135Q86UB9 458 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 TCEANCQ8N8B7 351 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 C12orf66Q96MD2 445 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 TSSK6Q9BXA6 273 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 TRIM36Q9NQ86 728 aa13.41□□□□□ -0.26
HCFC2-201ENST00000229330 FARSBQ9NSD9 589 aaKnown RBP13.41□□□□□ -0.26
HCFC2-201ENST00000229330 TCRBV3S1A0A5B6 114 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 SEPT4O43236 478 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 ATG13O75143 517 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 GGT1P19440 569 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 GBX2P52951 348 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 ENPP6Q6UWR7 440 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 TSPYL5Q86VY4 417 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 CEP97Q8IW35 865 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 LINC00471Q8N535 108 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 CHST4Q8NCG5 386 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 NFKBIDQ8NI38 313 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 EVLQ9UI08 416 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 MYBPHLA2RUH7 354 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 NRP1O14786 923 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 PLATP00750 562 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 APOC1P02654 83 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 S100A2P29034 98 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 GDI2P50395 445 aaKnown RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 TAF10Q12962 218 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 AGAP7PQ5VUJ5 663 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 PLCZ1Q86YW0 608 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 GPALPP1Q8IXQ4 340 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 ASB15Q8WXK1 588 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 DPF3Q92784 378 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 NAA50Q9GZZ1 169 aaKnown RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 KCNH6Q9H252 994 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 TRPV4Q9HBA0 871 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 POPDC3Q9HBV1 291 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 INTS6Q9UL03 887 aaKnown RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 EXOSC1Q9Y3B2 195 aaKnown RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 PTGDR2Q9Y5Y4 395 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 C5orf51A6NDU8 294 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 A8MU76 341 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 TRIM3O75382 744 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 CHRNB1P11230 501 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 ACADLP28330 430 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 SHQ1Q6PI26 577 aaKnown RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 CADM2Q8N3J6 435 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 PAPD5Q8NDF8 572 aaKnown RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 PHC3Q8NDX5 983 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 STOML3Q8TAV4 291 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 RNF31Q96EP0 1072 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 SYT11Q9BT88 431 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 SLC32A1Q9H598 525 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 RNF121Q9H920 327 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 ELL3Q9HB65 397 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 PCDHGB1Q9Y5G3 927 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 LOC730098B7Z3J9 87 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 LRRN3E7EW58 273 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 B4GAT1O43505 415 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 PIK3CBP42338 1070 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 MAN2A2P49641 1150 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 FADDQ13158 208 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 CDK5R2Q13319 367 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 SPCS2Q15005 226 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 USF2Q15853 346 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 MPPE1Q53F39 396 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 FAM76BQ5HYJ3 339 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 FRG2Q64ET8 278 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 LRRN1Q6UXK5 716 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 METTL25Q8N6Q8 603 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 ZNF557Q8N988 423 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 KDM1BQ8NB78 822 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 NSUN5Q96P11 429 aaKnown RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 FRG2BQ96QU4 278 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 LRRN3Q9H3W5 708 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 NLKQ9UBE8 527 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 OR10H1Q9Y4A9 318 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 PCDHGB5Q9Y5G0 923 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 ZNF142P52746 1687 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 ELNP15502 786 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 RPL10P27635 214 aaKnown RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 MAGEA12P43365 314 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 ARHGDIBP52566 201 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 ZNF33AQ06730 810 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 RBBP4Q09028 425 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 CLEC20AQ6ZU45 233 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 SNAPC3Q92966 411 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 TRIM43Q96BQ3 446 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-201ENST00000229330 ZNF558Q96NG5 402 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms