RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 NETO1Q8TDF5 533 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 CHTF18Q8WVB6 975 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 SLC13A3Q8WWT9 602 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 TOE1Q96GM8 510 aaKnown RBP10.29□□□□□ -0.76
CDCA3-201ENST00000229265 TEX37Q96LM6 180 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 CCDC115Q96NT0 180 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 SPATA9Q9BWV2 254 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 RAB11FIP5Q9BXF6 653 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 TMEM121BQ9BXQ6 578 aaPredicted RBP10.29□□□□□ -0.76
CDCA3-201ENST00000229265 SLC17A9Q9BYT1 436 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 ACPTQ9BZG2 426 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 OR52A5Q9H2C5 316 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 CMTM6Q9NX76 183 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 WSB2Q9NYS7 404 aaPredicted RBP10.29□□□□□ -0.76
CDCA3-201ENST00000229265 AHSPQ9NZD4 102 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 RALYQ9UKM9 306 aaKnown RBP10.29□□□□□ -0.76
CDCA3-201ENST00000229265 SNX13Q9Y5W8 968 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 PTGDR2Q9Y5Y4 395 aa10.29□□□□□ -0.76
CDCA3-201ENST00000229265 TPRP12270 2363 aaKnown RBP10.29□□□□□ -0.76
CDCA3-201ENST00000229265 A0A096LPI6 279 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 IGLON5A6NGN9 336 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 INPP4BO15327 924 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 SCELO95171 688 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 PCDH8O95206 1070 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 KCNK5O95279 499 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 ADRB1P08588 477 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 ZCCHC18P0CG32 403 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 CD59P13987 128 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 PSMA4P25789 261 aaKnown RBP10.28□□□□□ -0.76
CDCA3-201ENST00000229265 NUDT1P36639 197 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 LIMK1P53667 647 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 RPL38P63173 70 aaKnown RBP10.28□□□□□ -0.76
CDCA3-201ENST00000229265 TAP2Q03519 686 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 LIPEQ05469 1076 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 CYP2A13Q16696 494 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 TMEM259Q4ZIN3 620 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 TRIM61Q5EBN2 209 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.28□□□□□ -0.76
CDCA3-201ENST00000229265 CAPRIN2Q6IMN6 1127 aaKnown RBP10.28□□□□□ -0.76
CDCA3-201ENST00000229265 RNF111Q6ZNA4 994 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 PDZD3Q86UT5 571 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 GPR180Q86V85 440 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 ZNF547Q8IVP9 402 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 DCUN1D3Q8IWE4 304 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 KRT78Q8N1N4 520 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 LIX1Q8N485 282 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 ANKFN1Q8N957 763 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 TMEM102Q8N9M5 508 aaPredicted RBP10.28□□□□□ -0.76
CDCA3-201ENST00000229265 DEFB124Q8NES8 71 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 OR5K2Q8NHB8 316 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 FAM174AQ8TBP5 190 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 ZNF480Q8WV37 535 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 ZFPM2Q8WW38 1151 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 TFGQ92734 400 aaPredicted RBP10.28□□□□□ -0.76
CDCA3-201ENST00000229265 GATA6Q92908 595 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 ZNF570Q96NI8 536 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 PHF12Q96QT6 1004 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 KCTD14Q9BQ13 255 aaPredicted RBP10.28□□□□□ -0.76
CDCA3-201ENST00000229265 GPR174Q9BXC1 333 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 UGT2B28Q9BY64 529 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 ZDHHC5Q9C0B5 715 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 ATG10Q9H0Y0 220 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 PELI2Q9HAT8 420 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 POLMQ9NP87 494 aaPredicted RBP10.28□□□□□ -0.76
CDCA3-201ENST00000229265 FAM120CQ9NX05 1096 aaKnown RBP10.28□□□□□ -0.76
CDCA3-201ENST00000229265 RIMS3Q9UJD0 308 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 PCDHGA5Q9Y5G8 931 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 HEBP2Q9Y5Z4 205 aa10.28□□□□□ -0.76
CDCA3-201ENST00000229265 EPG5Q9HCE0 2579 aa10.27□□□□□ -0.76
CDCA3-201ENST00000229265 ACACBO00763 2458 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 SPAARA0A1B0GVQ0 90 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 ASPDHA6ND91 283 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 TMEM202A6NGA9 273 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 TNFRSF10CO14798 259 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 FFAR3O14843 346 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 MID1O15344 667 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 GPR42O15529 346 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 WNT1P04628 370 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 IGHV4-34P06331 123 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 ABCB1P08183 1280 aaPredicted RBP10.27□□□□□ -0.77
CDCA3-201ENST00000229265 RPSAP08865 295 aaKnown RBP10.27□□□□□ -0.77
CDCA3-201ENST00000229265 MYCLP1P12525 358 aaPredicted RBP10.27□□□□□ -0.77
CDCA3-201ENST00000229265 FASP25445 335 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 NDUFS1P28331 727 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 PDHA2P29803 388 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 SESN3P58005 492 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 HMGCS1Q01581 520 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 ACSM2AQ08AH3 577 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 BLMHQ13867 455 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 TRIP10Q15642 601 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 POM121L1PQ3SYA9 428 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 PRAMEF14Q5SWL7 426 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 INTS11Q5TA45 600 aaKnown RBP10.27□□□□□ -0.77
CDCA3-201ENST00000229265 LYSMD4Q5XG99 296 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 ACSM2BQ68CK6 577 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 PPP4R4Q6NUP7 873 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 NXPE4Q6UWF7 544 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 WASH2PQ6VEQ5 465 aa10.27□□□□□ -0.77
CDCA3-201ENST00000229265 R3HCC1LQ7Z5L2 792 aaKnown RBP10.27□□□□□ -0.77
CDCA3-201ENST00000229265 HORMAD1Q86X24 394 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms