RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 FAM186AA6NE01 2351 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 SIPA1L3O60292 1781 aaPredicted RBP13.32□□□□□ -0.28
NFKB1-201ENST00000226574 GGT1P19440 569 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 MAPK9P45984 424 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 CLCN4P51793 760 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 UGT8Q16880 541 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 MPPE1Q53F39 396 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 ARSIQ5FYB1 569 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 UBE2UQ5VVX9 321 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 RGMBQ6NW40 437 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 ZNF544Q6NX49 715 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 HACD2Q6Y1H2 254 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 NUDT18Q6ZVK8 323 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 THOC6Q86W42 341 aaKnown RBP13.32□□□□□ -0.28
NFKB1-201ENST00000226574 DCP2Q8IU60 420 aaKnown RBP13.32□□□□□ -0.28
NFKB1-201ENST00000226574 GALNT12Q8IXK2 581 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 KCT2Q8NC54 265 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 KLHDC9Q8NEP7 349 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 OR10G6Q8NH81 332 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 DOK4Q8TEW6 326 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 PHOX2BQ99453 314 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 PCP4L1A6NKN8 68 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 RTCAO00442 366 aaKnown RBP13.32□□□□□ -0.28
NFKB1-201ENST00000226574 POP4O95707 220 aaKnown RBP13.32□□□□□ -0.28
NFKB1-201ENST00000226574 NUDT14O95848 222 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 XKP51811 444 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 SP3Q02447 781 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 EMX1Q04741 257 aaPredicted RBP13.32□□□□□ -0.28
NFKB1-201ENST00000226574 CRHR2Q13324 411 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 CHST9Q7L1S5 443 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 NXPE1Q8N323 547 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 CD200R1Q8TD46 325 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 IPCEF1Q8WWN9 437 aaPredicted RBP13.32□□□□□ -0.28
NFKB1-201ENST00000226574 MYLIPQ8WY64 445 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 UBE2E3Q969T4 207 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 ALPK1Q96QP1 1244 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 TMED9Q9BVK6 235 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 ASPNQ9BXN1 380 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 ZBTB20Q9HC78 741 aaPredicted RBP13.32□□□□□ -0.28
NFKB1-201ENST00000226574 TMEM138Q9NPI0 162 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 B4GALT6Q9UBX8 382 aa13.32□□□□□ -0.28
NFKB1-201ENST00000226574 MRPS23Q9Y3D9 190 aaKnown RBP13.32□□□□□ -0.28
NFKB1-201ENST00000226574 KDELR3O43731 214 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 FGF4P08620 206 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 C8orf89P0DMQ9 161 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 LAMP1P11279 417 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 IDNKQ5T6J7 187 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 OR2AP1Q8NGE2 309 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 UBXN10Q96LJ8 280 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 DEFB118Q96PH6 123 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 MGLLQ99685 303 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 SYNDIG1Q9H7V2 258 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 NEK6Q9HC98 313 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 TM9SF3Q9HD45 589 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 DLGAP4Q9Y2H0 992 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 GLTPD2A6NH11 291 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 GSRP00390 522 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 C8GP07360 202 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 PFKLP17858 780 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 GSTM2P28161 218 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 MZT2AQ6P582 158 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 FAM124AQ86V42 546 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 CHPFQ8IZ52 775 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 OR8J3Q8NGG0 315 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 OR52L1Q8NGH7 329 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 CXorf40AQ8TE69 158 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 TSPEARQ8WU66 669 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 SH3YL1Q96HL8 342 aaPredicted RBP13.31□□□□□ -0.28
NFKB1-201ENST00000226574 C1orf74Q96LT6 269 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 QRFPRQ96P65 431 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 SYT17Q9BSW7 474 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 CHIAQ9BZP6 476 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 TRIT1Q9H3H1 467 aaKnown RBP13.31□□□□□ -0.28
NFKB1-201ENST00000226574 TUBB1Q9H4B7 451 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 CCDC177Q9NQR7 707 aaPredicted RBP13.31□□□□□ -0.28
NFKB1-201ENST00000226574 WDR37Q9Y2I8 494 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 A0A1B0GTL3 188 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 I6L893 689 aaPredicted RBP13.31□□□□□ -0.28
NFKB1-201ENST00000226574 MATN4O95460 622 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 FGBP02675 491 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 SMIM11AP58511 58 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 CSTF1Q05048 431 aaKnown RBP13.31□□□□□ -0.28
NFKB1-201ENST00000226574 SUZ12Q15022 739 aaKnown RBP13.31□□□□□ -0.28
NFKB1-201ENST00000226574 RBM12BQ8IXT5 1001 aaKnown RBP13.31□□□□□ -0.28
NFKB1-201ENST00000226574 Q8N9G6 341 aaPredicted RBP13.31□□□□□ -0.28
NFKB1-201ENST00000226574 ADAMTS15Q8TE58 950 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 SLC38A4Q969I6 547 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 SLC30A2Q9BRI3 323 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 WACQ9BTA9 647 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 MAF1Q9H063 256 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 DSN1Q9H410 356 aa13.31□□□□□ -0.28
NFKB1-201ENST00000226574 TLR4O00206 839 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 STX11O75558 287 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 GSTT2P0CG29 244 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 GSTT2BP0CG30 244 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 CRHBPP24387 322 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 TACR1P25103 407 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 PTGER1P34995 402 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 RAB15P59190 212 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 GPR17Q13304 367 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms