RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 CAMKK1Q8N5S9 505 aa9.13□□□□□ -0.95
CCDC113-201ENST00000219299 ZBTB8BQ8NAP8 495 aaPredicted RBP9.13□□□□□ -0.95
CCDC113-201ENST00000219299 SP7Q8TDD2 431 aaPredicted RBP9.13□□□□□ -0.95
CCDC113-201ENST00000219299 ADAMTS19Q8TE59 1207 aa9.13□□□□□ -0.95
CCDC113-201ENST00000219299 LPGAT1Q92604 370 aa9.13□□□□□ -0.95
CCDC113-201ENST00000219299 REXO5Q96IC2 774 aaKnown RBP9.13□□□□□ -0.95
CCDC113-201ENST00000219299 IL17FQ96PD4 163 aa9.13□□□□□ -0.95
CCDC113-201ENST00000219299 EFCAB11Q9BUY7 163 aa9.13□□□□□ -0.95
CCDC113-201ENST00000219299 TBC1D17Q9HA65 648 aa9.13□□□□□ -0.95
CCDC113-201ENST00000219299 LOC730098B7Z3J9 87 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 C5orf67F2Z3F1 127 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 RFXANKO14593 260 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 UGT2B11O75310 529 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 MAGEA6P43360 314 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 SEPHS1P49903 392 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 AGTR2P50052 363 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 AQP4P55087 323 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 COL9A2Q14055 689 aaPredicted RBP9.12□□□□□ -0.95
CCDC113-201ENST00000219299 NDUFA9Q16795 377 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 DPPA4Q7L190 304 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 R3HCC1LQ7Z5L2 792 aaKnown RBP9.12□□□□□ -0.95
CCDC113-201ENST00000219299 THOC6Q86W42 341 aaKnown RBP9.12□□□□□ -0.95
CCDC113-201ENST00000219299 RASSF5Q8WWW0 418 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 DTD2Q96FN9 168 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 CDX2Q99626 313 aaPredicted RBP9.12□□□□□ -0.95
CCDC113-201ENST00000219299 GDF15Q99988 308 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 ZNF780BQ9Y6R6 833 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 WASF2Q9Y6W5 498 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 BRCA1P38398 1863 aaKnown RBP9.12□□□□□ -0.95
CCDC113-201ENST00000219299 PARP14Q460N5 1801 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 TMEM233B4DJY2 109 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 ADSLP30566 484 aaPredicted RBP9.12□□□□□ -0.95
CCDC113-201ENST00000219299 CCR8P51685 355 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 C9orf64Q5T6V5 341 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 CPTPQ5TA50 214 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 PIK3C3Q8NEB9 887 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 OR13J1Q8NGT2 312 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 ZNF671Q8TAW3 534 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 TAMM41Q96BW9 452 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 NPAS2Q99743 824 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 SMPD3Q9NY59 655 aaPredicted RBP9.12□□□□□ -0.95
CCDC113-201ENST00000219299 G3V2T6 193 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 ITM2AO43736 263 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 DHFRP00374 187 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 SRFP11831 508 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 EIF2DP41214 584 aaKnown RBP9.12□□□□□ -0.95
CCDC113-201ENST00000219299 KIR3DL1P43629 444 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 PSMD4P55036 377 aaKnown RBP9.12□□□□□ -0.95
CCDC113-201ENST00000219299 HNRNPKP61978 463 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCDC113-201ENST00000219299 NFKB2Q00653 900 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 PHF19Q5T6S3 580 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 SLC9B2Q86UD5 537 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 ADIPOR2Q86V24 386 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 EXOSC8Q96B26 276 aaKnown RBP9.12□□□□□ -0.95
CCDC113-201ENST00000219299 MCMBPQ9BTE3 642 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 SPATA5L1Q9BVQ7 753 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 LOC285556D6RIA3 1793 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 PSMD11O00231 422 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 ITGAXP20702 1163 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 EFNA1P20827 205 aaPredicted RBP9.12□□□□□ -0.95
CCDC113-201ENST00000219299 CAPGP40121 348 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 MBOAT1Q6ZNC8 495 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 USP53Q70EK8 1073 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 UTS2BQ765I0 119 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 C12orf40Q86WS4 652 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 IZUMO1Q8IYV9 350 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 MOCOSQ96EN8 888 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 APOOQ9BUR5 198 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 SP140LQ9H930 580 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 CMTM6Q9NX76 183 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 OR10H1Q9Y4A9 318 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 OTOFQ9HC10 1997 aa9.12□□□□□ -0.95
CCDC113-201ENST00000219299 H7BY64 318 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 TFECO14948 347 aaPredicted RBP9.11□□□□□ -0.95
CCDC113-201ENST00000219299 VNN2O95498 520 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 ITGA2P17301 1181 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 IL18R1Q13478 541 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 LSM12Q3MHD2 195 aaKnown RBP9.11□□□□□ -0.95
CCDC113-201ENST00000219299 MACC1Q6ZN28 852 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 Q6ZNB5 142 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 RAB2BQ8WUD1 216 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 PRAP1Q96NZ9 151 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 VPS35Q96QK1 796 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 PRAMEF26H0Y7S4 382 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 GFRA2O00451 464 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 CD6P30203 668 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 MEF2AQ02078 507 aaPredicted RBP9.11□□□□□ -0.95
CCDC113-201ENST00000219299 ADGRE1Q14246 886 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 ALG11Q2TAA5 492 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 NACC2Q96BF6 587 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 PIGUQ9H490 435 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 C1orf109Q9NX04 203 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 TAS2R1Q9NYW7 299 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 COMMD9Q9P000 198 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 EGFL7Q9UHF1 273 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 H6PDO95479 791 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 ZNF140P52738 457 aaPredicted RBP9.11□□□□□ -0.95
CCDC113-201ENST00000219299 ACTR3P61158 418 aa9.11□□□□□ -0.95
CCDC113-201ENST00000219299 STXBP1P61764 594 aaKnown RBP9.11□□□□□ -0.95
CCDC113-201ENST00000219299 PTSQ03393 145 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms