RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 HNRNPCL3B7ZW38 293 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 MANBAO00462 879 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 B4GALT5O43286 388 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PEX14O75381 377 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 RGS9O75916 674 aaPredicted RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 MPC1LP0DKB6 136 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 HNRNPCL4P0DMR1 293 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ITGAMP11215 1152 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 FGF3P11487 239 aaPredicted RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 ITPKAP23677 461 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CLCN7P51798 805 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 DCDC1P59894 354 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 IRF9Q00978 393 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ABCA11PQ4W5N1 156 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PRPF38BQ5VTL8 546 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 USP51Q70EK9 711 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 KBTBD6Q86V97 674 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 AMIGO1Q86WK6 493 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ASCC1Q8N9N2 400 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 NUS1Q96E22 293 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 HS6ST2Q96MM7 605 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PELOQ9BRX2 385 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 FEM1AQ9BSK4 669 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 C12orf4Q9NQ89 552 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 SDHAF3Q9NRP4 125 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 SMPD4Q9NXE4 827 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ZDHHC2Q9UIJ5 367 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ACAD8Q9UKU7 415 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 MKL2Q9ULH7 1088 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 A0A1W2PRB8 838 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 NPC1O15118 1278 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PGLSO95336 258 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ATP1B2P14415 290 aaPredicted RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 ENGP17813 658 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CSNK2A2P19784 350 aaPredicted RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 KCNA5P22460 613 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 EIF2DP41214 584 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 CLCNKBP51801 687 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 NCBP2P52298 156 aaKnown RBP eCLIP4.29□□□□□ -1.72
CHD9-201ENST00000219084 GPX6P59796 221 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CYBRD1Q53TN4 286 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ZNF550Q7Z398 422 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 SLC22A16Q86VW1 577 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CFAP206Q8IYR0 622 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 HS3ST5Q8IZT8 346 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 MFSD2AQ8NA29 543 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 G6PC3Q9BUM1 346 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 SLC6A16Q9GZN6 736 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 SNTG1Q9NSN8 517 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 TMEM14AQ9Y6G1 99 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PIKFYVEQ9Y2I7 2098 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ANKRD66B4E2M5 251 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PQBP1O60828 265 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 PRAF2O60831 178 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 RFPL1O75677 317 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CST3P01034 146 aaPredicted RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 PIM1P11309 404 aaPredicted RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 ZNF823P16415 610 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 MAZP56270 477 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 MTPNP58546 118 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 EEF1DP3Q658K8 133 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 FUT10Q6P4F1 479 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ZNF782Q6ZMW2 699 aaPredicted RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 GALNT12Q8IXK2 581 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 XAGE5Q8WWM1 108 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 HYLS1Q96M11 299 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 TRNT1Q96Q11 434 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 LPIN3Q9BQK8 851 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 B3GNT5Q9BYG0 378 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 C12orf65Q9H3J6 166 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 NELFAQ9H3P2 528 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 APOBEC3GQ9HC16 384 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 ABI3Q9P2A4 366 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 IL36AQ9UHA7 158 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CPA4Q9UI42 421 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 MSRAQ9UJ68 235 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 TBC1D24Q9ULP9 559 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SPEF1Q9Y4P9 236 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SLC38A8A6NNN8 435 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 IRF6O14896 467 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ERAL1O75616 437 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 PPM1BO75688 479 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 MAP3K8P41279 467 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 S100A12P80511 92 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 GPR153Q6NV75 609 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 TRMT10BQ6PF06 316 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 LRRC69Q6ZNQ3 347 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 TMEM135Q86UB9 458 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SLC15A3Q8IY34 581 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 GPR135Q8IZ08 494 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 OTUB2Q96DC9 234 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PWWP2AQ96N64 755 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 DHRS4Q9BTZ2 278 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 TAPBPLQ9BX59 468 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 MINDY3Q9H8M7 445 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 WDR81Q562E7 1941 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ARID2Q68CP9 1835 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ISM1B1AKI9 464 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 NEDD8-MDP1E9PL57 170 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 FBP2O00757 339 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms