RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 MARCH4Q9P2E8 410 aaPredicted RBP14.21□□□□□ -0.13
PTPRA-201ENST00000216877 TMCC3Q9ULS5 477 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 V9GYH0 126 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 A0A1W2PPL8 197 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 CDC7O00311 574 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 PLA2G10O15496 165 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 MSCO60682 206 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 ALPPP05187 535 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 CCR1P32246 355 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 GBX2P52951 348 aaPredicted RBP14.2□□□□□ -0.14
PTPRA-201ENST00000216877 SEMA3BQ13214 749 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 SPATS1Q496A3 300 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 C9orf131Q5VYM1 1079 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 PIAS4Q8N2W9 510 aaPredicted RBP14.2□□□□□ -0.14
PTPRA-201ENST00000216877 PDLIM5Q96HC4 596 aaKnown RBP14.2□□□□□ -0.14
PTPRA-201ENST00000216877 DCAF13Q9NV06 445 aaKnown RBP14.2□□□□□ -0.14
PTPRA-201ENST00000216877 TNFRSF10DQ9UBN6 386 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 PSORS1C1Q9UIG5 152 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 MAB21L2Q9Y586 359 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 NPEPPSL1A6NEC2 478 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 CBX4O00257 560 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 PTPRAP18433 802 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 FPR1P21462 350 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 HLA-DMAP28067 261 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 MATKP42679 507 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 CLCN3P51790 818 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 CRYZQ08257 329 aaKnown RBP14.2□□□□□ -0.14
PTPRA-201ENST00000216877 CBLBQ13191 982 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 ASAH1Q13510 395 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 DNAJC22Q8N4W6 341 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 OR52B6Q8NGF0 335 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 COQ10AQ96MF6 247 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 BARHL1Q9BZE3 327 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 CDT1Q9H211 546 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 TMEM245Q9H330 911 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 ZNF768Q9H5H4 540 aaKnown RBP14.2□□□□□ -0.14
PTPRA-201ENST00000216877 PIGVQ9NUD9 493 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 M0R233 179 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 KPNA5O15131 536 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 GUCA1CO95843 209 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 CASP9P55211 416 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 RAB8AP61006 207 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 FGL2Q14314 439 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 RFTN2Q52LD8 501 aaPredicted RBP14.2□□□□□ -0.14
PTPRA-201ENST00000216877 HSD17B12Q53GQ0 312 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 LRFN4Q6PJG9 635 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 ZZZ3Q8IYH5 903 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.2□□□□□ -0.145e-7■■■■■ 65.3
PTPRA-201ENST00000216877 CENPIQ92674 756 aaPredicted RBP14.2□□□□□ -0.14
PTPRA-201ENST00000216877 OTULINQ96BN8 352 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 C12orf42Q96LP6 360 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 SLC6A15Q9H2J7 730 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 PHIPQ8WWQ0 1821 aa14.2□□□□□ -0.14
PTPRA-201ENST00000216877 TLR5O60602 858 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 DNASE1P24855 282 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 HMGCLP35914 325 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 ARL2P36404 184 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 HAAOP46952 286 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 CSTF1Q05048 431 aaKnown RBP14.19□□□□□ -0.14
PTPRA-201ENST00000216877 CDKL4Q5MAI5 379 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 FAM171A1Q5VUB5 890 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 SMYD5Q6GMV2 418 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 DOK6Q6PKX4 331 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 ZNF600Q6ZNG1 722 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 PTCHD4Q6ZW05 846 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 TRIM69Q86WT6 500 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 C3orf58Q8NDZ4 430 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 B3GNT7Q8NFL0 401 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 MYLPFQ96A32 169 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 TTYH1Q9H313 450 aaPredicted RBP14.19□□□□□ -0.14
PTPRA-201ENST00000216877 ZIM2Q9NZV7 527 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 NDRG4Q9ULP0 352 aaKnown RBP14.19□□□□□ -0.14
PTPRA-201ENST00000216877 CLDN5O00501 218 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 BET1O15155 118 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 CPSF4O95639 269 aaKnown RBP14.19□□□□□ -0.14
PTPRA-201ENST00000216877 MOCS2O96007 188 aaPredicted RBP14.19□□□□□ -0.14
PTPRA-201ENST00000216877 ACSM4P0C7M7 580 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 HNMTP50135 292 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 MAZP56270 477 aaKnown RBP14.19□□□□□ -0.14
PTPRA-201ENST00000216877 FRMPD2BQ6IN97 320 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 OR56A4Q8NGH8 313 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 SLC35F5Q8WV83 523 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 GORASP2Q9H8Y8 452 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 ANKRA2Q9H9E1 313 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 ASAH2Q9NR71 780 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 RAB23Q9ULC3 237 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 B3GALT4O96024 378 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 ADRA1BP35368 520 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 PSPHP78330 225 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 VLDLRP98155 873 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 ZSWIM9Q86XI8 627 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 RNF130Q86XS8 419 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 STAG3L4Q8TBR4 150 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 UPRTQ96BW1 309 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 FEVQ99581 238 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 SIRT5Q9NXA8 310 aa14.19□□□□□ -0.14
PTPRA-201ENST00000216877 SSX5O60225 188 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 APOL3O95236 402 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 UROSP10746 265 aa14.18□□□□□ -0.14
PTPRA-201ENST00000216877 ACADMP11310 421 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms