RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 LRRC70Q7Z2Q7 622 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 TRABD2AQ86V40 505 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 TM9SF4Q92544 642 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 SLC6A18Q96N87 628 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 WASHC1A8K0Z3 465 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 ABOP16442 354 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 ACRV1P26436 265 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 RBPJQ06330 500 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 CXorf57Q6NSI4 855 aaKnown RBP13.32□□□□□ -0.28
SIX4-201ENST00000216513 WASH2PQ6VEQ5 465 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 ARCQ7LC44 396 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 C8orf59Q8N0T1 100 aaPredicted RBP13.32□□□□□ -0.28
SIX4-201ENST00000216513 HORMAD2Q8N7B1 307 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 TRMT2BQ96GJ1 504 aaKnown RBP13.32□□□□□ -0.28
SIX4-201ENST00000216513 EBF4Q9BQW3 602 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 TWSG1Q9GZX9 223 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 PLEKHA1Q9HB21 404 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 PREBQ9HCU5 417 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 EFCAB10A6NFE3 127 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 SLC6A4P31645 630 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 ACTR3P61158 418 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 HSF2Q03933 536 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 WASHC2DQ5SRD0 308 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 NIPAL1Q6NVV3 410 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 GLIS1Q8NBF1 620 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 GTPBP3Q969Y2 492 aaKnown RBP13.32□□□□□ -0.28
SIX4-201ENST00000216513 TEFMQ96QE5 360 aaKnown RBP13.32□□□□□ -0.28
SIX4-201ENST00000216513 SEC61A2Q9H9S3 476 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 OR52A4PA6NMU1 304 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 TCEA3O75764 348 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 WNT7BP56706 349 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 OLR1P78380 273 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 MGAT3Q09327 533 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 DSC3Q14574 896 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 TMEM198Q66K66 360 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 DUSP26Q9BV47 211 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 TFB2MQ9H5Q4 396 aaKnown RBP13.31□□□□□ -0.28
SIX4-201ENST00000216513 TMEM9BQ9NQ34 198 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 FAM234BA2RU67 622 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 BIRC5O15392 142 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 SNUPNO95149 360 aaKnown RBP13.31□□□□□ -0.28
SIX4-201ENST00000216513 MAPK14Q16539 360 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 SLC39A3Q9BRY0 314 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 STARD5Q9NSY2 213 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 A8MVJ9 347 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 CXorf49A8MYA2 514 aaPredicted RBP13.31□□□□□ -0.28
SIX4-201ENST00000216513 CTGFP29279 349 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 CAPZA1P52907 286 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 KIAA0319Q5VV43 1072 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 FIGLAQ6QHK4 219 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 OAFQ86UD1 273 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 GPAT4Q86UL3 456 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 UMODL1-AS1Q8N2C9 162 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 DAZLQ92904 295 aaKnown RBP13.31□□□□□ -0.28
SIX4-201ENST00000216513 HSD3B7Q9H2F3 369 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 C11orf16Q9NQ32 467 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 HPF1Q9NWY4 346 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 ITM2AO43736 263 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 SELENOVP59797 346 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 RPS14P62263 151 aaKnown RBP13.31□□□□□ -0.28
SIX4-201ENST00000216513 OR1F2PQ96R84 312 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 PPP4R1LQ9P1A2 415 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.31□□□□□ -0.28
SIX4-201ENST00000216513 SPIN1Q9Y657 262 aaPredicted RBP13.31□□□□□ -0.28
SIX4-201ENST00000216513 SIX3O95343 332 aaPredicted RBP13.31□□□□□ -0.28
SIX4-201ENST00000216513 CRHR1P34998 444 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 SLC6A9P48067 706 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 SPINT3P49223 89 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 MXD1Q05195 221 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 GANABQ14697 944 aaKnown RBP13.31□□□□□ -0.28
SIX4-201ENST00000216513 RNF111Q6ZNA4 994 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 GAREM2Q75VX8 874 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 PARS2Q7L3T8 475 aaKnown RBP13.31□□□□□ -0.28
SIX4-201ENST00000216513 LRRC15Q8TF66 581 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 ADAM30Q9UKF2 790 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 MED31Q9Y3C7 131 aa13.31□□□□□ -0.28
SIX4-201ENST00000216513 A0A0U1RQS6 177 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 DUXAA6NLW8 204 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 MAGEB17A8MXT2 336 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 FAM25EA8MYX2 175 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 TFECO14948 347 aaPredicted RBP13.3□□□□□ -0.28
SIX4-201ENST00000216513 MTPNP58546 118 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 EIPR1Q53HC9 387 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 PYDC2Q56P42 97 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 ARL13AQ5H913 290 aaPredicted RBP13.3□□□□□ -0.28
SIX4-201ENST00000216513 PLEKHS1Q5SXH7 462 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 FRG2Q64ET8 278 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 C1orf94Q6P1W5 598 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 IQCHQ86VS3 1027 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 PNPLA1Q8N8W4 532 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 FRG2BQ96QU4 278 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 TBX5Q99593 518 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 GP1BBP13224 206 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 TCN2P20062 427 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 PLCXD2Q0VAA5 305 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 OR2T12Q8NG77 320 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 DIO2Q92813 273 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 ZBTB20Q9HC78 741 aaPredicted RBP13.3□□□□□ -0.28
SIX4-201ENST00000216513 UPB1Q9UBR1 384 aa13.3□□□□□ -0.28
SIX4-201ENST00000216513 PAPPA2Q9BXP8 1791 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms