RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 MSANTD3Q96H12 275 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 TMEM80Q96HE8 168 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 PDCD2LQ9BRP1 358 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 FDXACB1Q9BRP7 624 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 DEC1Q9P2X7 70 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 NME7Q9Y5B8 376 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 ALPK2Q86TB3 2170 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CICQ96RK0 1608 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CDHR4A6H8M9 788 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 FOXN1O15353 648 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 DIRAS3O95661 229 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 MMP2P08253 660 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 ARFRP1Q13795 201 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CHST4Q8NCG5 386 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 TMEM125Q96AQ2 219 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 ATG4CQ96DT6 458 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 OR4K3Q96R72 315 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 TMEM39BQ9GZU3 492 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 TAS2R9Q9NYW1 312 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF69Q9UC07 566 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 LAMP5Q9UJQ1 280 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 POLR3HQ9Y535 204 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 PKD1L3Q7Z443 1732 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 SPATA31C2B4DYI2 1134 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 HHLA1C9JL84 531 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 XPNPEP2O43895 674 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 PTPRAP18433 802 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 HOXA10P31260 410 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 AKT2P31751 481 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF132P52740 706 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 MEF2AQ02078 507 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 MEF2DQ14814 521 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 AMHR2Q16671 573 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 C16orf59Q7L2K0 433 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 RTL10Q7L3V2 364 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 OVCA2Q8WZ82 227 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 RAB7BQ96AH8 199 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 SULT4A1Q9BR01 284 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 ZBTB26Q9HCK0 441 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 SAGE1Q9NXZ1 904 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 VPS29Q9UBQ0 182 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 NUDT19A8MXV4 375 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 TULP2O00295 520 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CPNE3O75131 537 aaKnown RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 IMPDH1P20839 514 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 BMPR2Q13873 1038 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 DPYSL2Q16555 572 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CXorf57Q6NSI4 855 aaKnown RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 BORCS8Q96FH0 119 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 TTYH2Q9BSA4 534 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 Q9N2J8 555 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 INPP5EQ9NRR6 644 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 OXSMQ9NWU1 459 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 LCHNA4D1U4 455 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 K7EPI3 171 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 CDC7O00311 574 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 PORP16435 677 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 RFC2P35250 354 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 NUDT1P36639 197 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 VASPP50552 380 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 RAB5CP51148 216 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 KLF10Q13118 480 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 ABHD12BQ7Z5M8 362 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 ZBTB8BQ8NAP8 495 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 PLEKHO2Q8TD55 490 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 HASPINQ8TF76 798 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 RGCCQ9H4X1 137 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 HEBP1Q9NRV9 189 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 TMEM39AQ9NV64 488 aa5.92□□□□□ -1.46
VPS13D-201ENST00000011700 PPIEQ9UNP9 301 aaKnown RBP5.92□□□□□ -1.46
VPS13D-201ENST00000011700 J3QR89 54 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SPTLC1O15269 473 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 FLRT2O43155 660 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SSX4O60224 188 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 CAPN3P20807 821 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 FPR1P21462 350 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 UBAP2LQ14157 1087 aaKnown RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 LASP1Q14847 261 aaKnown RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ADGRF1Q5T601 910 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 EGFLAMQ63HQ2 1017 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 RAB12Q6IQ22 244 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 FSTL4Q6MZW2 842 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ARSKQ6UWY0 536 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLAMF9Q96A28 289 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC35G5Q96KT7 338 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 INPP4AQ96PE3 977 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 GAD1Q99259 594 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 MYOCQ99972 504 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 DUSP26Q9BV47 211 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SNRNP25Q9BV90 132 aaKnown RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLA2Q9H6Q3 261 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 POMPQ9Y244 141 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 TCAF1Q9Y4C2 921 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 CLCA3PQ9Y6N3 262 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 LOC100130705A0A1B0GUX0 176 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 RNF212BA8MTL3 300 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PAK4O96013 591 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ALDOAP04075 364 aaKnown RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 C2P06681 752 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 CDKN2BP42772 138 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms