RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Pacsin2Q9WVE8 486 aaKnown RBP13.72□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Rgs11Q9Z2H1 443 aa13.72□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Apol8A2VDH7 339 aaKnown RBP13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 2210016F16RikG3X8U3 338 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 C3ar1O09047 477 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Kif1cO35071 1100 aaKnown RBP13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Top3aO70157 1003 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 PspnO70300 156 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 PigrO70570 771 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Cd4P06332 457 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Cox5aP12787 146 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Adrb2P18762 418 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Oprm1P42866 398 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 AcadlP51174 430 aaKnown RBP13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Ruvbl1P60122 456 aaKnown RBP13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Bop1P97452 732 aaKnown RBP13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Npas2P97460 816 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Serpina3mQ03734 418 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 UbqlnlQ14DL0 610 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 ClpbQ60649 677 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Znf148Q61624 794 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Prm3Q62100 101 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Vmn2r26Q6TAC4 855 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Slc16a9Q7TM99 508 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Got1l1Q7TSV6 404 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Ip6k2Q80V72 448 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Pgs1Q8BHF7 553 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Itih5Q8BJD1 952 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Zfp263Q8CF60 680 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Fbxw17Q8CFE8 466 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Otud7aQ8R554 926 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Klrb1fQ8VD98 217 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Olfr1090Q8VGA6 313 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Olfr606Q8VGZ8 319 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Nek8Q91ZR4 698 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Cd209dQ91ZW8 237 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Stk33Q924X7 491 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Gnl2Q99LH1 728 aaKnown RBP13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 P2ry12Q9CPV9 347 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Exo5Q9CXP9 373 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Gkn3Q9D0T7 191 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Spata9Q9D9R3 252 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Zfpl1Q9DB43 310 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Gpr88Q9EPB7 384 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Scgb2b20Q9JI02 112 aa13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Ruvbl2Q9WTM5 463 aaKnown RBP13.71□□□□□ -0.21
Ccdc88c-204ENSMUST00000223097 Gm44973A0A140LJJ1 189 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Ndor1A2AI05 598 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 AccsA2AIG8 502 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Spats1A2RRY8 269 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Gm10406A6NAS4 205 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Wdr76A6PWY4 622 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Brpf3B2KF05 1204 aaKnown RBP13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Ccdc13D3YV10 709 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Gm5926E9PWJ8 236 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Scgb2b19J3QM75 112 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Foxq1O70220 400 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 JunP05627 334 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Man2a1P27046 1150 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Cd9P40240 226 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Rab6bP61294 208 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Ccl21aP84444 133 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Ccl21bP86792 133 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Ccl21cP86793 133 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 NrtnP97463 195 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 4930430A15RikQ05AC5 485 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Ankub1Q3UUE9 192 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Kctd19Q562E2 927 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Xkr9Q5GH62 373 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Tnfaip3Q60769 775 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Kcna5Q61762 602 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Lefty1Q64280 368 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Tsga10Q6NY15 697 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Olfr798Q7TRH8 311 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 NfascQ810U3 1240 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Pcid2Q8BFV2 399 aaKnown RBP13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Wdr47Q8CGF6 920 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Klhdc8aQ91XA8 350 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Far1Q922J9 515 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 5530400C23RikQ9D3I0 173 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 4933436I01RikQ9D3T1 429 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Ccdc97Q9DBT3 340 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Ndufaf3Q9JKL4 185 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Mpp5Q9JLB2 675 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 ProdhQ9WU79 599 aa13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 FlncQ8VHX6 2726 aaKnown RBP13.7□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Fam71f2B2RXB0 297 aa13.69□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Vmn2r73D3Z7M3 851 aa13.69□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Muc3E9PWP7 378 aa13.69□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Adh6aE9Q5Z6 375 aa13.69□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 EsrraO08580 422 aa13.69□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 P01673 111 aa13.69□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 P01675 107 aa13.69□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 P01676 107 aa13.69□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 P01677 107 aa13.69□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 P01678 107 aa13.69□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Hspa1bP17879 642 aaKnown RBP13.69□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 Cdh4P39038 913 aa13.69□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 AbatP61922 500 aa13.69□□□□□ -0.22
Ccdc88c-204ENSMUST00000223097 F8a1Q00558 380 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms