RNA–Protein interactions for RNA: ENSMUST00000031377.8

Scarb2-201, Transcript of Lysosome membrane protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scarb2, Length 4,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2-201ENSMUST00000031377 Bbs4Q8C1Z7 520 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Olfr1278Q8VF39 313 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Lgals2Q9CQW5 130 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Tmem53Q9D0Z3 276 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Nusap1Q9ERH4 427 aaKnown RBP13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Pex11bQ9Z210 259 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 NinQ61043 2035 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Zfp600A2A7V0 737 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Fam71f2B2RXB0 297 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Pld3O35405 488 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Ankdd1bQ14DN9 521 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Treml2Q2LA85 329 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Krt76Q3UV17 594 aaKnown RBP13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Q3UY34 256 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Nr0b1Q61066 472 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Lemd2Q6DVA0 511 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 RhdQ8CF94 418 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Gulp1Q8K2A1 304 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Olfr357Q8VFP4 308 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Vmn1r69Q8VIC1 319 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Bpifa3Q9D9J8 232 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Trem1Q9JKE2 230 aa13.12□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Cd300ld2A2A7W0 305 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Gm3159K7N760 267 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Ulk1O70405 1051 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 PahP16331 453 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Pmp22P16646 161 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Hnf1bP27889 558 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Rgs16P97428 201 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Pnpla1Q3V1D5 599 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Apex2Q68G58 516 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Kxd1Q80XH1 177 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Gjc2Q8BQU6 440 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Stfa2l1Q8BWM3 103 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Q8BWQ6 963 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Dnajc27Q8CFP6 273 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Timd2Q8R183 305 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Vmn1r33Q8R2E0 305 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Capn8Q91VA3 703 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Tada1Q99LM9 335 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Mrps33Q9D2R8 106 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Wdr53Q9DB94 358 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Fam217bA2AJW5 387 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Gm21738J3QP72 227 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Yme1l1O88967 715 aaKnown RBP13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Ugt2b17P17717 530 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Kcnj12P52187 427 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Spc25Q3UA16 226 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Slc25a51Q5HZI9 298 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 2900092C05RikQ5I0V9 184 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Wnt8aQ64527 354 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Maml1Q6T264 1020 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Olfr1308Q7TQX0 320 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Reps2Q80XA6 521 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Hsfy2Q80Y37 392 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Ugt2b38Q91WH2 530 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Retreg3Q9CQV4 466 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Slc22a4Q9Z306 553 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Ech1O35459 327 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Wnt6P22727 364 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Rps17P63276 135 aaKnown RBP13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Nr0b2Q62227 260 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Ap1s3Q7TN05 154 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Olfr1051Q7TR76 308 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Csnk1g1Q8BTH8 459 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Dpep2Q8C255 478 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Aim2Q91VJ1 354 aaKnown RBP13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 St3gal4Q91Y74 333 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 MlycdQ99J39 492 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Kdelr2Q9CQM2 212 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Dnaja4Q9JMC3 397 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Mbtps1Q9WTZ2 1052 aa13.11□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Crisp4E9PVG4 293 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Edil3O35474 480 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Ctla2aP12399 137 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Gja1P23242 382 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Ppm1bP36993 390 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Grik2P39087 908 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Entpd1P55772 510 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 PmlQ60953 885 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 VclQ64727 1066 aaKnown RBP13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Ccdc126Q8BIS8 140 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Tusc3Q8BTV1 347 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Pp2d1Q8BVT6 620 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Lcmt2Q8BYR1 686 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Klhl12Q8BZM0 568 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Slc38a4Q8R1S9 547 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Vmn1r30Q8R2D2 302 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Q9D5Y0 588 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Myo7aP97479 2215 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Mterf1bB9EJ57 379 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Kcnk4O88454 398 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Mtnd3P03899 115 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 LckP06240 509 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 DckP43346 260 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Drd4P51436 387 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Apobec1P51908 229 aaKnown RBP13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Kcnh6Q32ME0 950 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Dyrk2Q5U4C9 599 aa13.1□□□□□ -0.31
Scarb2-201ENSMUST00000031377 CcnhQ61458 323 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms