RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 MEF2AQ02078 507 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-219ENST00000641513 RPL6Q02878 288 aaKnown RBP8.54□□□□□ -1.04
PHGDH-219ENST00000641513 FOLH1Q04609 750 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 EMX2Q04743 252 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 ILF3Q12906 894 aaKnown RBP eCLIP8.54□□□□□ -1.04
PHGDH-219ENST00000641513 LAPTM5Q13571 262 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 SLBPQ14493 270 aaKnown RBP eCLIP8.54□□□□□ -1.04
PHGDH-219ENST00000641513 ARHGAP19Q14CB8 494 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 FXNQ16595 210 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 CYP2A13Q16696 494 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 GRAMD1BQ3KR37 738 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 LIN52Q52LA3 116 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 RFTN2Q52LD8 501 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-219ENST00000641513 PDCD4Q53EL6 469 aaKnown RBP8.54□□□□□ -1.04
PHGDH-219ENST00000641513 ZNF542PQ5EBM4 170 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 PAGE2BQ5JRK9 111 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 CATSPEREQ5SY80 951 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 PRAMEF9Q5VWM5 478 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 LPCAT4Q643R3 524 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 ATG9BQ674R7 924 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 MED27Q6P2C8 311 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 BORAQ6PGQ7 559 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 CYP20A1Q6UW02 462 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 NXPE4Q6UWF7 544 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 LCTLQ6UWM7 567 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 SLCO4C1Q6ZQN7 724 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 TRIM46Q7Z4K8 759 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 ADCK2Q7Z695 626 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 ARPINQ7Z6K5 226 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 C17orf64Q86WR6 236 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 ZFAND4Q86XD8 727 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 TRIM48Q8IWZ4 208 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 LIX1Q8N485 282 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 RNF175Q8N4F7 328 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 TMEM102Q8N9M5 508 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-219ENST00000641513 TMEM145Q8NBT3 493 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 CCL4L1Q8NHW4 92 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 JPH3Q8WXH2 748 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-219ENST00000641513 POP5Q969H6 163 aaKnown RBP8.54□□□□□ -1.04
PHGDH-219ENST00000641513 REPS1Q96D71 796 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 CMTM7Q96FZ5 175 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 SLC45A3Q96JT2 553 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 ZNF597Q96LX8 424 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 MTERF1Q99551 399 aaKnown RBP8.54□□□□□ -1.04
PHGDH-219ENST00000641513 NRTNQ99748 197 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 SGPP1Q9BX95 441 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 RAB11FIP5Q9BXF6 653 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 ACPTQ9BZG2 426 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 BRINP2Q9C0B6 783 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 C1orf109Q9NX04 203 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 TBC1D29Q9UFV1 150 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 TAC3Q9UHF0 121 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 SH2B3Q9UQQ2 575 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-219ENST00000641513 PCDHGA11Q9Y5H2 935 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 GPR45Q9Y5Y3 372 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 COMMD3-BMI1R4GMX3 469 aa8.54□□□□□ -1.04
PHGDH-219ENST00000641513 GOLGA4Q13439 2230 aaKnown RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 PRAMEF33A0A0G2JMD5 474 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 CCDC154A6NI56 674 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 AXIN1O15169 862 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 MYO1DO94832 1006 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 G6PDP11413 515 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 FCGR1AP12314 374 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 BMP2P12643 396 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 HOXB6P17509 224 aaKnown RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 CD22P20273 847 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 CD27P26842 260 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 MAOBP27338 520 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 PSMB5P28074 263 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 MAPK1P28482 360 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 RAB28P51157 221 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 POLR2JP52435 117 aaKnown RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 PHEXP78562 749 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 MRPS22P82650 360 aaKnown RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 TXNL4AP83876 142 aaKnown RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 MS4A2Q01362 244 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 CSTF3Q12996 717 aaKnown RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 PLCL1Q15111 1095 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 RBBP5Q15291 538 aaKnown RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 USP39Q53GS9 565 aaKnown RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 PRRT3Q5FWE3 981 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 LCN8Q6JVE9 175 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 SLC36A4Q6YBV0 504 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 FKBP9P1Q75LS8 142 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 LPCAT2Q7L5N7 544 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 TAF8Q7Z7C8 310 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 LRRC56Q8IYG6 542 aaPredicted RBP8.53□□□□□ -1.04
PHGDH-219ENST00000641513 GJD3Q8N144 294 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 SLC22A18ASQ8N1D0 253 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 KRT78Q8N1N4 520 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 CAMKK1Q8N5S9 505 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 EFCAB3Q8N7B9 438 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 ANKFN1Q8N957 763 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 OR52E1Q8NGJ3 308 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 CDC26Q8NHZ8 85 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 CLDN23Q96B33 292 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 EFCAB11Q9BUY7 163 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 OSBPL11Q9BXB4 747 aa8.53□□□□□ -1.04
PHGDH-219ENST00000641513 GSDMCQ9BYG8 508 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms