RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 RIPOR1Q6ZS17 1223 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 VN1R5Q7Z5H4 357 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 TAF8Q7Z7C8 310 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 AMIGO1Q86WK6 493 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 CHTF18Q8WVB6 975 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 PATE1Q8WXA2 126 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 CCDC124Q96CT7 223 aaKnown RBP17.53■□□□□ 0.4
PHGDH-209ENST00000641074 METTL2AQ96IZ6 378 aaKnown RBP17.53■□□□□ 0.4
PHGDH-209ENST00000641074 TSSK3Q96PN8 268 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 SERPINI1Q99574 410 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 ZBTB18Q99592 522 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 SLC39A3Q9BRY0 314 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 IER2Q9BTL4 223 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 LEF1Q9UJU2 399 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-209ENST00000641074 PLXND1Q9Y4D7 1925 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 ARHGEF17Q96PE2 2063 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-209ENST00000641074 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 DYTNA2CJ06 578 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 TGFB1P01137 390 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 JUNDP17535 347 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 CXCR2P25025 360 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 REEP5Q00765 189 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 CEACAM7Q14002 265 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 TRMT5Q32P41 509 aaKnown RBP17.53■□□□□ 0.4
PHGDH-209ENST00000641074 C1orf146Q5VVC0 180 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 CWF19L1Q69YN2 538 aaKnown RBP17.53■□□□□ 0.4
PHGDH-209ENST00000641074 SFTPA2Q8IWL1 248 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 FAM20CQ8IXL6 584 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 TMEFF1Q8IYR6 380 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 C1orf52Q8N6N3 182 aaKnown RBP17.53■□□□□ 0.4
PHGDH-209ENST00000641074 GLB1L3Q8NCI6 653 aaPredicted RBP17.53■□□□□ 0.4
PHGDH-209ENST00000641074 GPATCH1Q9BRR8 931 aaKnown RBP17.53■□□□□ 0.4
PHGDH-209ENST00000641074 CLMPQ9H6B4 373 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 TM9SF3Q9HD45 589 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 ADA2Q9NZK5 511 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 OR6C2Q9NZP2 312 aa17.53■□□□□ 0.4
PHGDH-209ENST00000641074 APOBEC3BQ9UH17 382 aaKnown RBP17.53■□□□□ 0.4
PHGDH-209ENST00000641074 RUVBL1Q9Y265 456 aaKnown RBP17.53■□□□□ 0.4
PHGDH-209ENST00000641074 ABCA7Q8IZY2 2146 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 FEZF1A0PJY2 475 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 FXYD1O00168 92 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 TLR4O00206 839 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 CSNK1G2P78368 415 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 RAE1P78406 368 aaKnown RBP17.52■□□□□ 0.4
PHGDH-209ENST00000641074 ZNF423Q2M1K9 1284 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 FAM174BQ3ZCQ3 159 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 C6orf163Q5TEZ5 329 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 SLC2A7Q6PXP3 512 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 MAMSTRQ6ZN01 415 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 IQCHQ86VS3 1027 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.52■□□□□ 0.45e-6■■■■■ 81.8
PHGDH-209ENST00000641074 FAM9CQ8IZT9 166 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 RNF148Q8N7C7 305 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 ANKRD53Q8N9V6 530 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 GPR156Q8NFN8 814 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 C1orf216Q8TAB5 229 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 EGLN2Q96KS0 407 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 LRRC61Q9BV99 259 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 RHBGQ9H310 441 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 OR51B5Q9H339 312 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 SPAG4Q9NPE6 437 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 GID8Q9NWU2 228 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 NMRK1Q9NWW6 199 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 POMPQ9Y244 141 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 EML5Q05BV3 1969 aa17.52■□□□□ 0.4
PHGDH-209ENST00000641074 CHRM5P08912 532 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-209ENST00000641074 XRCC1P18887 633 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-209ENST00000641074 PHEXP78562 749 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 NFYCQ13952 458 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 CAPRIN1Q14444 709 aaKnown RBP17.51■□□□□ 0.39
PHGDH-209ENST00000641074 SPIN4Q56A73 249 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 PRRT3Q5FWE3 981 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 SPANXN4Q5MJ08 99 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 TSSK4Q6SA08 328 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 TRIM48Q8IWZ4 208 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 MINDY1Q8N5J2 469 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 OR2L3Q8NG85 312 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 LRRC58Q96CX6 371 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 HOPXQ9BPY8 73 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-209ENST00000641074 SRMSQ9H3Y6 488 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 NT5DC2Q9H857 520 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 MRPS30Q9NP92 439 aaKnown RBP17.51■□□□□ 0.39
PHGDH-209ENST00000641074 SLAMF8Q9P0V8 285 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 KNL1Q8NG31 2342 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 SAP18O00422 153 aaKnown RBP17.51■□□□□ 0.39
PHGDH-209ENST00000641074 BTN3A3O00478 584 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 MYO1DO94832 1006 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 CSF2P04141 144 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 PCSK2P16519 638 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 ACTR3P61158 418 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 ABATP80404 500 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 GPR18Q14330 331 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 ARMCX6Q7L4S7 300 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 ADCK2Q7Z695 626 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 SYT12Q8IV01 421 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 RIMKLAQ8IXN7 391 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 ADGRF3Q8IZF5 1079 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 NAGSQ8N159 534 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 FBXL6Q8N531 539 aa17.51■□□□□ 0.39
PHGDH-209ENST00000641074 TMEM74Q96NL1 305 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms