RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 TUBB3Q13509 450 aa20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 RBBP5Q15291 538 aaKnown RBP20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 C3orf38Q5JPI3 329 aa20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 RNF44Q7L0R7 432 aa20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 MILR1Q7Z6M3 343 aa20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 PLD3Q8IV08 490 aa20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 TRIM42Q8IWZ5 723 aa20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 WDR36Q8NI36 951 aaKnown RBP20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 RERGQ96A58 199 aaPredicted RBP20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 CDK15Q96Q40 435 aa20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 OR6C1Q96RD1 312 aa20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 TRMOQ9BU70 441 aa20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 NTMT1Q9BV86 223 aa20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 INTS9Q9NV88 658 aaKnown RBP20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 GEMIN8Q9NWZ8 242 aaKnown RBP20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 OCIAD1Q9NX40 245 aa20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 PLCL2Q9UPR0 1127 aa20.68■□□□□ 0.9
TSPAN9-208ENST00000640568 KNTC1P50748 2209 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 TRBC2A0A5B9 178 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 TMEM150CB9EJG8 249 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 OR1F1O43749 312 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 HYAL3O43820 417 aaPredicted RBP20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 CTSVO60911 334 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 FOLR1P15328 257 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 BGNP21810 368 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 SERPINB5P36952 375 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 HNF4AP41235 474 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 RELAQ04206 551 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 GPR19Q15760 415 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 GRHL2Q6ISB3 625 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 GPRIN3Q6ZVF9 776 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 DNAJC22Q8N4W6 341 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 OR4F6Q8NGB9 312 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 UBE2E3Q969T4 207 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 WDR34Q96EX3 536 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 FCRL4Q96PJ5 515 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 ZNF382Q96SR6 550 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 PITHD1Q9GZP4 211 aaPredicted RBP20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 EML4Q9HC35 981 aaKnown RBP20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 FGF21Q9NSA1 209 aa20.67■□□□□ 0.9
TSPAN9-208ENST00000640568 PLD2O14939 933 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 WFS1O76024 890 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 SERPINE1P05121 402 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 HGFP14210 728 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 CASP2P42575 452 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 ATP1A2P50993 1020 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 MAPK10P53779 464 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 PKNOX1P55347 436 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 PCDH1Q08174 1060 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 TRAF3Q13114 568 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 RCN2Q14257 317 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 FBXO42Q6P3S6 717 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 TMIGD1Q6UXZ0 262 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 MCATQ8IVS2 390 aaKnown RBP20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 THAP11Q96EK4 314 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 SPNS1Q9H2V7 528 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 MID1IP1Q9NPA3 183 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 SIDT1Q9NXL6 827 aaKnown RBP20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 PISDQ9UG56 409 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 RARRES3Q9UL19 164 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 SATB2Q9UPW6 733 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 DCHS1Q96JQ0 3298 aa20.66■□□□□ 0.9
TSPAN9-208ENST00000640568 POLR1CO15160 346 aaPredicted RBP20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 PRAMEF4O60810 478 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 CRCPO75575 148 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 MSL3P1P0C860 447 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 GRK2P25098 689 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 CPSF6Q16630 551 aaKnown RBP eCLIP20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 PRAMEF9Q5VWM5 478 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 TTC19Q6DKK2 380 aaPredicted RBP20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 MED27Q6P2C8 311 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 MARCH9Q86YJ5 346 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 GPR135Q8IZ08 494 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 ZNF655Q8N720 491 aaPredicted RBP20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 L3MBTL4Q8NA19 623 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 ZNF740Q8NDX6 193 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 TTLQ8NG68 377 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 REPS1Q96D71 796 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 SLC39A1Q9NY26 324 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 SERTAD3Q9UJW9 196 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 PILRAQ9UKJ1 303 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 RNF11Q9Y3C5 154 aa20.65■□□□□ 0.9
TSPAN9-208ENST00000640568 B4E171 279 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 PPP6CO00743 305 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 SRPX2O60687 465 aaPredicted RBP20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 OR4F21O95013 312 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 EIF2S1P05198 315 aaKnown RBP20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 PCNAP12004 261 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 CCL4P13236 92 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 ITIH1P19827 911 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 CD22P20273 847 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 BCL6P41182 706 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 TSPAN7P41732 249 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 CCR10P46092 362 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 VSX2P58304 361 aaPredicted RBP20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 RAB15P59190 212 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 MC2RQ01718 297 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 E2F2Q14209 437 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 ATG16L1Q676U5 607 aa20.64■□□□□ 0.89
TSPAN9-208ENST00000640568 FRMPD2BQ6IN97 320 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms