RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 TTC9Q92623 222 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 TSNARE1Q96NA8 513 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 ACTL8Q9H568 366 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 TLK1Q9UKI8 766 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 RNF112Q9ULX5 631 aa25.48■■□□□ 1.67
VEGFA-231ENST00000640499 FARSAQ9Y285 508 aaKnown RBP25.48■■□□□ 1.67
VEGFA-231ENST00000640499 ZNF891A8MT65 544 aaPredicted RBP25.47■■□□□ 1.67
VEGFA-231ENST00000640499 CNOT3O75175 753 aaKnown RBP25.47■■□□□ 1.67
VEGFA-231ENST00000640499 STATHP02808 62 aa25.47■■□□□ 1.67
VEGFA-231ENST00000640499 SHBGP04278 402 aa25.47■■□□□ 1.67
VEGFA-231ENST00000640499 RAB40ALP0C0E4 278 aa25.47■■□□□ 1.67
VEGFA-231ENST00000640499 ALAS2P22557 587 aa25.47■■□□□ 1.67
VEGFA-231ENST00000640499 BCL6P41182 706 aa25.47■■□□□ 1.67
VEGFA-231ENST00000640499 ARSFP54793 590 aa25.47■■□□□ 1.67
VEGFA-231ENST00000640499 CCDC91Q7Z6B0 441 aa25.47■■□□□ 1.67
VEGFA-231ENST00000640499 CSNK1A1LQ8N752 337 aa25.47■■□□□ 1.67
VEGFA-231ENST00000640499 ZNF740Q8NDX6 193 aa25.47■■□□□ 1.67
VEGFA-231ENST00000640499 SLC5A11Q8WWX8 675 aa25.47■■□□□ 1.67
VEGFA-231ENST00000640499 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.47■■□□□ 1.675e-12■■■■■ 46.3
VEGFA-231ENST00000640499 DPH2Q9BQC3 489 aaPredicted RBP25.47■■□□□ 1.67
VEGFA-231ENST00000640499 VPS11Q9H270 941 aa25.47■■□□□ 1.67
VEGFA-231ENST00000640499 KCND3Q9UK17 655 aa25.47■■□□□ 1.67
VEGFA-231ENST00000640499 RUVBL1Q9Y265 456 aaKnown RBP25.47■■□□□ 1.67
VEGFA-231ENST00000640499 IKBKGQ9Y6K9 419 aa25.47■■□□□ 1.67
VEGFA-231ENST00000640499 UBXN8O00124 270 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 DSCR3O14972 297 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 PRAMEF4O60810 478 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 KERAO60938 352 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 RFPL1O75677 317 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 KRT38O76015 456 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 CNTFP26441 200 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 GLRBP48167 497 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 FOXL2P58012 376 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 DCDP81605 110 aaKnown RBP25.46■■□□□ 1.67
VEGFA-231ENST00000640499 NKAIN1Q4KMZ8 207 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 YOD1Q5VVQ6 348 aaPredicted RBP25.46■■□□□ 1.67
VEGFA-231ENST00000640499 PRAMEF9Q5VWM5 478 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 SULT1C3Q6IMI6 304 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 COX15Q7KZN9 410 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 ENDOVQ8N8Q3 282 aaKnown RBP25.46■■□□□ 1.67
VEGFA-231ENST00000640499 EXT2Q93063 718 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 TM4SF19Q96DZ7 209 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 MACROD1Q9BQ69 325 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 SARGQ9BW04 601 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 NLNQ9BYT8 704 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 TXLNGQ9NUQ3 528 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 FETUBQ9UGM5 382 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 CACNA1GO43497 2377 aa25.46■■□□□ 1.67
VEGFA-231ENST00000640499 A0A1B0GX78 115 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 CREG1O75629 220 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 WDR47O94967 919 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 SNRPAP09012 282 aaKnown RBP25.45■■□□□ 1.66
VEGFA-231ENST00000640499 PRKAR1AP10644 381 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 EPORP19235 508 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 DEKP35659 375 aaKnown RBP25.45■■□□□ 1.66
VEGFA-231ENST00000640499 HSPA7P48741 367 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 CCR8P51685 355 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 SLC9A5Q14940 896 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 ACAP2Q15057 778 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 NCF4Q15080 339 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 LINC00303Q3SY05 128 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 CRTC2Q53ET0 693 aaPredicted RBP25.45■■□□□ 1.66
VEGFA-231ENST00000640499 TAF1BQ53T94 588 aaPredicted RBP25.45■■□□□ 1.66
VEGFA-231ENST00000640499 TCAIMQ8N3R3 496 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 TTC29Q8NA56 475 aaPredicted RBP25.45■■□□□ 1.66
VEGFA-231ENST00000640499 ZSCAN1Q8NBB4 408 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 RHEBL1Q8TAI7 183 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 MZB1Q8WU39 189 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 BBC3Q96PG8 261 aaPredicted RBP25.45■■□□□ 1.66
VEGFA-231ENST00000640499 CD274Q9NZQ7 290 aa25.45■■□□□ 1.66
VEGFA-231ENST00000640499 MRPS2Q9Y399 296 aaKnown RBP25.45■■□□□ 1.66
VEGFA-231ENST00000640499 KLF7O75840 302 aaPredicted RBP25.44■■□□□ 1.66
VEGFA-231ENST00000640499 ATXN8OSP0DMR3 200 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 AGXTP21549 392 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 OR1D4P47884 311 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 AGTR2P50052 363 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 EMP3P54852 163 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 RPS15AP62244 130 aaKnown RBP25.44■■□□□ 1.66
VEGFA-231ENST00000640499 CDC20Q12834 499 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 IL10RAQ13651 578 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 ERV3-1Q14264 604 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 FAM83EQ2M2I3 478 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 ERCC6LQ2NKX8 1250 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 FAM214AQ32MH5 1076 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 MRPL14Q6P1L8 145 aaKnown RBP25.44■■□□□ 1.66
VEGFA-231ENST00000640499 NXPE4Q6UWF7 544 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 TIFABQ6ZNK6 161 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 METTL27Q8N6F8 245 aaPredicted RBP25.44■■□□□ 1.66
VEGFA-231ENST00000640499 MFSD9Q8NBP5 474 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 NUDT4Q9NZJ9 180 aa25.44■■□□□ 1.66
VEGFA-231ENST00000640499 PCSK5Q92824 1860 aa25.43■■□□□ 1.66
VEGFA-231ENST00000640499 MAP2K7O14733 419 aa25.43■■□□□ 1.66
VEGFA-231ENST00000640499 VARSP26640 1264 aaKnown RBP25.43■■□□□ 1.66
VEGFA-231ENST00000640499 RPS15P62841 145 aaKnown RBP25.43■■□□□ 1.66
VEGFA-231ENST00000640499 TBR1Q16650 682 aa25.43■■□□□ 1.66
VEGFA-231ENST00000640499 TECRLQ5HYJ1 363 aa25.43■■□□□ 1.66
VEGFA-231ENST00000640499 WDR93Q6P2C0 686 aa25.43■■□□□ 1.66
VEGFA-231ENST00000640499 C16orf46Q6P387 395 aa25.43■■□□□ 1.66
VEGFA-231ENST00000640499 SLCO4C1Q6ZQN7 724 aa25.43■■□□□ 1.66
VEGFA-231ENST00000640499 TAOK1Q7L7X3 1001 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms