RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 LCTLQ6UWM7 567 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 ARHGEF39Q8N4T4 335 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 Q8NA96 180 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 GALNT11Q8NCW6 608 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 OR11G2Q8NGC1 345 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 ALKBH8Q96BT7 664 aaKnown RBP23.97■■□□□ 1.43
VEGFA-230ENST00000640482 OLFM1Q99784 485 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 SGPP1Q9BX95 441 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 MKKSQ9NPJ1 570 aaPredicted RBP23.97■■□□□ 1.43
VEGFA-230ENST00000640482 ASH1LQ9NR48 2969 aaKnown RBP23.97■■□□□ 1.43
VEGFA-230ENST00000640482 ARL15Q9NXU5 204 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 LUZP4Q9P127 313 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 B3GNT3Q9Y2A9 372 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 NUP210LQ5VU65 1888 aa23.96■■□□□ 1.43
VEGFA-230ENST00000640482 KCNE1BA0A087WTH5 132 aa23.96■■□□□ 1.43
VEGFA-230ENST00000640482 E7ESA3 106 aa23.96■■□□□ 1.43
VEGFA-230ENST00000640482 FANCGO15287 622 aa23.96■■□□□ 1.43
VEGFA-230ENST00000640482 TP73O15350 636 aa23.96■■□□□ 1.43
VEGFA-230ENST00000640482 P2RX6O15547 441 aa23.96■■□□□ 1.43
VEGFA-230ENST00000640482 ALOX12BO75342 701 aa23.96■■□□□ 1.43
VEGFA-230ENST00000640482 UBAP2LQ14157 1087 aaKnown RBP23.96■■□□□ 1.43
VEGFA-230ENST00000640482 INPP5JQ15735 1006 aaPredicted RBP23.96■■□□□ 1.43
VEGFA-230ENST00000640482 CAPN13Q6MZZ7 669 aaPredicted RBP23.96■■□□□ 1.43
VEGFA-230ENST00000640482 SLC26A11Q86WA9 606 aa23.96■■□□□ 1.43
VEGFA-230ENST00000640482 ZADH2Q8N4Q0 377 aa23.96■■□□□ 1.43
VEGFA-230ENST00000640482 HAUS8Q9BT25 410 aa23.96■■□□□ 1.43
VEGFA-230ENST00000640482 NSMCE4AQ9NXX6 385 aa23.96■■□□□ 1.43
VEGFA-230ENST00000640482 ANKRD12Q6UB98 2062 aa23.96■■□□□ 1.43
VEGFA-230ENST00000640482 A0A0A6YYC8 382 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-230ENST00000640482 FAM187AA6NFU0 413 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 I3L1I5 382 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-230ENST00000640482 FOXS1O43638 330 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 HPP00738 406 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 ENO2P09104 434 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-230ENST00000640482 GRK3P35626 688 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 AVPR1BP47901 424 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 EMP2P54851 167 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 CSNK1G2P78368 415 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 CALCOCO2Q13137 446 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 FASTKD3Q14CZ7 662 aaKnown RBP23.95■■□□□ 1.42
VEGFA-230ENST00000640482 AGAP7PQ5VUJ5 663 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 DUPD1Q68J44 220 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 MAATS1Q7Z4T9 603 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 STRA8Q7Z7C7 330 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 PARP9Q8IXQ6 854 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 ZBED8Q8IZ13 594 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 AMER3Q8N944 861 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 ATL1Q8WXF7 558 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 PDLIM5Q96HC4 596 aaKnown RBP23.95■■□□□ 1.42
VEGFA-230ENST00000640482 AGAP4Q96P64 663 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 TGIF2Q9GZN2 237 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 LHPPQ9H008 270 aa23.95■■□□□ 1.42
VEGFA-230ENST00000640482 ILKAPQ9H0C8 392 aaPredicted RBP23.95■■□□□ 1.42
VEGFA-230ENST00000640482 IDSB3KWA1 339 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 PCDH17O14917 1159 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 HEXBP07686 556 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 CXCR2P25025 360 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 PGGT1BP53609 377 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 CBLBQ13191 982 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 ATG9BQ674R7 924 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 VN1R4Q7Z5H5 301 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 IQCKQ8N0W5 287 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 CAMKVQ8NCB2 501 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 FAM129AQ9BZQ8 928 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 MOCS1Q9NZB8 636 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 MAP10Q9P2G4 905 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 SH2B3Q9UQQ2 575 aa23.94■■□□□ 1.42
VEGFA-230ENST00000640482 HEATR5BQ9P2D3 2071 aa23.93■■□□□ 1.42
VEGFA-230ENST00000640482 H0YIG0 161 aa23.93■■□□□ 1.42
VEGFA-230ENST00000640482 CDH1P12830 882 aa23.93■■□□□ 1.42
VEGFA-230ENST00000640482 SAT1P21673 171 aa23.93■■□□□ 1.42
VEGFA-230ENST00000640482 ILF2Q12905 390 aaKnown RBP23.93■■□□□ 1.42
VEGFA-230ENST00000640482 PLEKHN1Q494U1 663 aaPredicted RBP23.93■■□□□ 1.42
VEGFA-230ENST00000640482 LAPTM4BQ86VI4 370 aa23.93■■□□□ 1.42
VEGFA-230ENST00000640482 ZC3HC1Q86WB0 502 aaKnown RBP23.93■■□□□ 1.42
VEGFA-230ENST00000640482 FAM26EQ8N5C1 309 aa23.93■■□□□ 1.42
VEGFA-230ENST00000640482 SPATA4Q8NEY3 305 aa23.93■■□□□ 1.42
VEGFA-230ENST00000640482 OR56A3Q8NH54 315 aa23.93■■□□□ 1.42
VEGFA-230ENST00000640482 FBXL8Q96CD0 374 aa23.93■■□□□ 1.42
VEGFA-230ENST00000640482 THOC3Q96J01 351 aaKnown RBP23.93■■□□□ 1.42
VEGFA-230ENST00000640482 ERP44Q9BS26 406 aa23.93■■□□□ 1.42
VEGFA-230ENST00000640482 SLC29A3Q9BZD2 475 aa23.93■■□□□ 1.42
VEGFA-230ENST00000640482 WHRNQ9P202 907 aa23.93■■□□□ 1.42
VEGFA-230ENST00000640482 PSAT1Q9Y617 370 aa23.93■■□□□ 1.42
VEGFA-230ENST00000640482 FAM95CA0A1B0GW59 222 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 FEZF1A0PJY2 475 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 CLEC18AA5D8T8 446 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 FFAR3O14843 346 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 GPR42O15529 346 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 STATHP02808 62 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 NPPBP16860 134 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 ZNF37AP17032 561 aaPredicted RBP23.92■■□□□ 1.42
VEGFA-230ENST00000640482 CASQ1P31415 396 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 MRPS25P82663 173 aaKnown RBP23.92■■□□□ 1.42
VEGFA-230ENST00000640482 PRR30Q53SZ7 412 aaPredicted RBP23.92■■□□□ 1.42
VEGFA-230ENST00000640482 CLEC18BQ6UXF7 455 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 NKAPQ8N5F7 415 aaKnown RBP23.92■■□□□ 1.42
VEGFA-230ENST00000640482 CLEC18CQ8NCF0 446 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 PYROXD1Q8WU10 500 aa23.92■■□□□ 1.42
VEGFA-230ENST00000640482 PYCR2Q96C36 320 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms