RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 OR2L2Q8NH16 312 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 PTERQ96BW5 349 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 MFSD3Q96ES6 412 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 MAGEB10Q96LZ2 347 aaPredicted RBP13.17□□□□□ -0.3
HLA-C-210ENST00000640219 CYTH2Q99418 400 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 EPS8L2Q9H6S3 715 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 COG4Q9H9E3 785 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 USH1CQ9Y6N9 552 aa13.17□□□□□ -0.3
HLA-C-210ENST00000640219 E7ESA3 106 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 SPAG7O75391 227 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 BANF1O75531 89 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 UBOX5O94941 541 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 EZRP15311 586 aaKnown RBP13.16□□□□□ -0.3
HLA-C-210ENST00000640219 ADRA1DP25100 572 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 ARNTP27540 789 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 SKIV2L2P42285 1042 aaKnown RBP13.16□□□□□ -0.3
HLA-C-210ENST00000640219 CA7P43166 264 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 ELF3P78545 371 aaPredicted RBP13.16□□□□□ -0.3
HLA-C-210ENST00000640219 RIPK1Q13546 671 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 PRAMEF13Q5VWM6 474 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 LMNTD1Q8N9Z9 388 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 PHC3Q8NDX5 983 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 CATSPER1Q8NEC5 780 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 NR4A3Q92570 626 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 MTFMTQ96DP5 389 aaKnown RBP13.16□□□□□ -0.3
HLA-C-210ENST00000640219 TACO1Q9BSH4 297 aaKnown RBP13.16□□□□□ -0.3
HLA-C-210ENST00000640219 TUBB6Q9BUF5 446 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 EIF2B3Q9NR50 452 aaKnown RBP13.16□□□□□ -0.3
HLA-C-210ENST00000640219 C1GALT1Q9NS00 363 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 NDOR1Q9UHB4 597 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 CIDEBQ9UHD4 219 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 SH3BGRL2Q9UJC5 107 aa13.16□□□□□ -0.3
HLA-C-210ENST00000640219 TSR3Q9UJK0 312 aaKnown RBP13.16□□□□□ -0.3
HLA-C-210ENST00000640219 CFAP99D6REC4 459 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 TM9SF1O15321 606 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 MAP3K7O43318 606 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 MGRN1O60291 552 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 KCNJ13O60928 360 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 ALOX12BO75342 701 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 GSTA2P09210 222 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 SLC35G4P0C7Q5 338 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 MSL3P1P0C860 447 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 CBSLP0DN79 551 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 TROVE2P10155 538 aaKnown RBP eCLIP13.15□□□□□ -0.3
HLA-C-210ENST00000640219 RALBP11234 206 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 NQO1P15559 274 aaKnown RBP13.15□□□□□ -0.3
HLA-C-210ENST00000640219 POLR2CP19387 275 aaPredicted RBP13.15□□□□□ -0.3
HLA-C-210ENST00000640219 TPSB2P20231 275 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 PSMA3P25788 255 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 CBSP35520 551 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 RASSF2P50749 326 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 FOXL2P58012 376 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 PRAMEP78395 509 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 ACVR1Q04771 509 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 Q0VFX4 171 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 BNIP1Q12981 228 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 PRKAA1Q13131 559 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 BOP1Q14137 746 aaKnown RBP13.15□□□□□ -0.3
HLA-C-210ENST00000640219 MPP2Q14168 576 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 TPSAB1Q15661 275 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 ZKSCAN8Q15776 578 aaPredicted RBP13.15□□□□□ -0.3
HLA-C-210ENST00000640219 PDK4Q16654 411 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 GALNTL6Q49A17 601 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 GPR33Q49SQ1 333 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 PCID2Q5JVF3 399 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 HP1BP3Q5SSJ5 553 aaPredicted RBP13.15□□□□□ -0.3
HLA-C-210ENST00000640219 C1orf189Q5VU69 101 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 ADGRD1Q6QNK2 874 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 AFTPHQ6ULP2 937 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 CAPN12Q6ZSI9 719 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 CAND1Q86VP6 1230 aaKnown RBP13.15□□□□□ -0.3
HLA-C-210ENST00000640219 FBXO36Q8NEA4 188 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 OR1N1Q8NGS0 311 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 OR4L1Q8NH43 312 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 HM13Q8TCT9 377 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 DENND1AQ8TEH3 1009 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 FAM136AQ96C01 138 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 KLHL29Q96CT2 875 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 LINC00615Q96LM1 132 aaPredicted RBP13.15□□□□□ -0.3
HLA-C-210ENST00000640219 CCM2Q9BSQ5 444 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 HGH1Q9BTY7 390 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 OR52A5Q9H2C5 316 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 XKR8Q9H6D3 395 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 ACSS3Q9H6R3 686 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 SLC6A20Q9NP91 592 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 TREX1Q9NSU2 369 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 ABCF3Q9NUQ8 709 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 IFT80Q9P2H3 777 aaPredicted RBP13.15□□□□□ -0.3
HLA-C-210ENST00000640219 FBXL4Q9UKA2 621 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 PLAGL1Q9UM63 463 aa13.15□□□□□ -0.3
HLA-C-210ENST00000640219 SEC16AO15027 2179 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 KRT87PA6NCN2 255 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 CNOT3O75175 753 aaKnown RBP13.14□□□□□ -0.31
HLA-C-210ENST00000640219 UNC5CO95185 931 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 UMODP07911 640 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 NEFHP12036 1026 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 AGAP20933 346 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 SMSP52788 366 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 DCDP81605 110 aaKnown RBP13.14□□□□□ -0.31
HLA-C-210ENST00000640219 ADORA2A-AS1P86434 159 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms