RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SLC22A15Q8IZD6 547 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 TMBIM1Q969X1 311 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 FAM162AQ96A26 154 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 NMD3Q96D46 503 aaKnown RBP14.58□□□□□ -0.08
TRIM3-215ENST00000639856 FAM120BQ96EK7 910 aaKnown RBP14.58□□□□□ -0.08
TRIM3-215ENST00000639856 AURKBQ96GD4 344 aaPredicted RBP14.58□□□□□ -0.08
TRIM3-215ENST00000639856 HIC2Q96JB3 615 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 EPHX3Q9H6B9 360 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 MBNL1Q9NR56 388 aaKnown RBP14.58□□□□□ -0.08
TRIM3-215ENST00000639856 VPS29Q9UBQ0 182 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 ZFR2Q9UPR6 939 aaKnown RBP14.58□□□□□ -0.08
TRIM3-215ENST00000639856 NPC1O15118 1278 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 SNAP29O95721 258 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 SLC16A8O95907 504 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 PRPS1L1P21108 318 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 HNF4AP41235 474 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 GZMMP51124 257 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 HNRNPFP52597 415 aaKnown RBP14.57□□□□□ -0.08
TRIM3-215ENST00000639856 SH3BGRP55822 239 aaPredicted RBP14.57□□□□□ -0.08
TRIM3-215ENST00000639856 PCDH1Q08174 1060 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 MTAPQ13126 283 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 DPY19L1Q2PZI1 675 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 OTUD3Q5T2D3 398 aaPredicted RBP14.57□□□□□ -0.08
TRIM3-215ENST00000639856 CWF19L1Q69YN2 538 aaKnown RBP14.57□□□□□ -0.08
TRIM3-215ENST00000639856 GRHL2Q6ISB3 625 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 ZNF786Q8N393 782 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 GANCQ8TET4 914 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 MED8Q96G25 268 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 FBXL20Q96IG2 436 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 FOPNLQ96NB1 174 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 OR4K3Q96R72 315 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 GABRG3Q99928 467 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 VCX3AQ9NNX9 186 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 SPATA6Q9NWH7 488 aaPredicted RBP14.57□□□□□ -0.08
TRIM3-215ENST00000639856 FBXL12Q9NXK8 326 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 PCDHGA11Q9Y5H2 935 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 TRIOO75962 3097 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 A0A1W2PQF6 199 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 CCDC160A6NGH7 325 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 H0YIV9 168 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 RFXANKO14593 260 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 PRMT3O60678 531 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 CREG1O75629 220 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 GSNP06396 782 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 IMPA1P29218 277 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 CDKN2CP42773 168 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 KIR3DL1P43629 444 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 ALDH3B2P48448 385 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 ARSFP54793 590 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 CDK3Q00526 305 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 GTF2H3Q13889 308 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 NKG7Q16617 165 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 PATL1Q86TB9 770 aaKnown RBP14.57□□□□□ -0.08
TRIM3-215ENST00000639856 SYT12Q8IV01 421 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 C10orf111Q8N326 155 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 OR56A3Q8NH54 315 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 GFM2Q969S9 779 aaKnown RBP14.57□□□□□ -0.08
TRIM3-215ENST00000639856 SLC47A1Q96FL8 570 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 COX14Q96I36 57 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 MTERF1Q99551 399 aaKnown RBP14.57□□□□□ -0.08
TRIM3-215ENST00000639856 EBPLQ9BY08 206 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 KCNK12Q9HB15 430 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 DCAF13Q9NV06 445 aaKnown RBP14.57□□□□□ -0.08
TRIM3-215ENST00000639856 GPRC5BQ9NZH0 403 aa14.57□□□□□ -0.08
TRIM3-215ENST00000639856 TRIM64A6NGJ6 449 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 H0YAE9 185 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 H3BM21 787 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 POP7O75817 140 aaKnown RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 PRKD3O94806 890 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 CLIC3O95833 236 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 B3GALT4O96024 378 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 HSD3B1P14060 373 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 HOXB2P14652 356 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 HSD3B2P26439 372 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 ALDH3A2P51648 485 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 ADARB1P78563 741 aaKnown RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 ABHD18Q0P651 414 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 LSAMPQ13449 338 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 NFE2L1Q14494 772 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 STARD3Q14849 445 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 OR4F3Q6IEY1 312 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 ADAMTSL4Q6UY14 1074 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 FAM83HQ6ZRV2 1179 aaPredicted RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 USP51Q70EK9 711 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 FKBP9P1Q75LS8 142 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 C11orf96Q7Z7L8 435 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 METTL2AQ96IZ6 378 aaKnown RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 PKP4Q99569 1192 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 TUBA8Q9NY65 449 aaPredicted RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 PTTG2Q9NZH5 202 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 DNAJB9Q9UBS3 223 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 RUVBL1Q9Y265 456 aaKnown RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 OR1A2Q9Y585 309 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 TRIM64CA6NLI5 447 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 BMP10O95393 424 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 PAK4O96013 591 aaPredicted RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 ALPLP05186 524 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 ASGR2P07307 311 aa14.56□□□□□ -0.08
TRIM3-215ENST00000639856 RPL10P27635 214 aaKnown RBP14.56□□□□□ -0.08
TRIM3-215ENST00000639856 CDH15P55291 814 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms