RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 NAP1L1P55209 391 aaKnown RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 RPL15P61313 204 aaKnown RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 RAC1P63000 192 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 PDK1Q15118 436 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 ARHGAP17Q68EM7 881 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 PLAG1Q6DJT9 500 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 ARMC6Q6NXE6 501 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 NPNTQ6UXI9 565 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 LIPIQ6XZB0 460 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 TRILQ7L0X0 811 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 NLRP9Q7RTR0 991 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 C1QL2Q7Z5L3 287 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 SLC26A11Q86WA9 606 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 FAM20CQ8IXL6 584 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 BEST3Q8N1M1 668 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 XXYLT1Q8NBI6 393 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 OR4F5Q8NH21 305 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 FBXW5Q969U6 566 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 COX14Q96I36 57 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 PIMREGQ9BSJ6 248 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 TMEM120AQ9BXJ8 343 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 PITPNM3Q9BZ71 974 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 C14orf105Q9NVL8 296 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 H2AFY2Q9P0M6 372 aaPredicted RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 PPARGC1AQ9UBK2 798 aaKnown RBP3.22□□□□□ -1.89
CCDC7-213ENST00000639290 CDYLQ9Y232 598 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 LIPGQ9Y5X9 500 aa3.22□□□□□ -1.89
CCDC7-213ENST00000639290 NCKAP5O14513 1909 aa3.21□□□□□ -1.89
CCDC7-213ENST00000639290 A0A1B0GX78 115 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 KCNU1A8MYU2 1149 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 XPO1O14980 1071 aaKnown RBP3.21□□□□□ -1.9
CCDC7-213ENST00000639290 TEX33O43247 280 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 DTNBO60941 627 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 CLPXO76031 633 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 VNN1O95497 513 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 FTCDO95954 541 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 SLC35E2P0CK97 266 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 ITGAMP11215 1152 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 PRTN3P24158 256 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 FOXN2P32314 431 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 KRT20P35900 424 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 CCT6AP40227 531 aaKnown RBP3.21□□□□□ -1.9
CCDC7-213ENST00000639290 ZNF136P52737 540 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 PDE1AP54750 535 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 POLR2LP62875 67 aaKnown RBP3.21□□□□□ -1.9
CCDC7-213ENST00000639290 GSTM4Q03013 218 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 KIF5AQ12840 1032 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 RALGDSQ12967 914 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 AUHQ13825 339 aaKnown RBP3.21□□□□□ -1.9
CCDC7-213ENST00000639290 CNN3Q15417 329 aaKnown RBP3.21□□□□□ -1.9
CCDC7-213ENST00000639290 CCNG2Q16589 344 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 PRSS53Q2L4Q9 553 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 ZNF667Q5HYK9 610 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 DMRTC1Q5HYR2 192 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 FAM209BQ5JX69 171 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 NSUN5P2Q63ZY6 315 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 RAP1GAP2Q684P5 730 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 DOK3Q7L591 496 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 SLC22A16Q86VW1 577 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 NDUFAF2Q8N183 169 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 SLC5A8Q8N695 610 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 ANKRD52Q8NB46 1076 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 PCYOX1LQ8NBM8 494 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 RUFY2Q8WXA3 655 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 IMMP1LQ96LU5 166 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 PTCHD1Q96NR3 888 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 SLC30A3Q99726 388 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 TIMM29Q9BSF4 260 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 RAB34Q9BZG1 259 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 CDC42EP4Q9H3Q1 356 aaKnown RBP3.21□□□□□ -1.9
CCDC7-213ENST00000639290 CALHM2Q9HA72 323 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 IMP3Q9NV31 184 aaKnown RBP3.21□□□□□ -1.9
CCDC7-213ENST00000639290 POMT2Q9UKY4 750 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 SCO2A0A1W2PP80 73 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 FRG2CA6NGY1 282 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 ANKRD63C9JTQ0 380 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 K7ERQ8 282 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 FOXN3O00409 490 aaPredicted RBP3.21□□□□□ -1.9
CCDC7-213ENST00000639290 KPNA5O15131 536 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 GSTA4O15217 222 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 SHOXO15266 292 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 ZSCAN9O15535 394 aaPredicted RBP3.21□□□□□ -1.9
CCDC7-213ENST00000639290 PRPF4O43172 522 aaKnown RBP eCLIP3.21□□□□□ -1.9
CCDC7-213ENST00000639290 CDC40O60508 579 aaKnown RBP eCLIP3.21□□□□□ -1.9
CCDC7-213ENST00000639290 SLITRK5O94991 958 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 ASS1P00966 412 aaKnown RBP3.21□□□□□ -1.9
CCDC7-213ENST00000639290 CELA2AP08217 269 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 XBP1P17861 261 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 ADRA2CP18825 462 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 ADORA2BP29275 332 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 NR4A2P43354 598 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 CSNK1DP48730 415 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 PDLIM4P50479 330 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 GPR18Q14330 331 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 STILQ15468 1287 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 EXT1Q16394 746 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 P3H1Q32P28 736 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 ZC3H12AQ5D1E8 599 aaKnown RBP3.21□□□□□ -1.9
CCDC7-213ENST00000639290 OLFML2AQ68BL7 652 aa3.21□□□□□ -1.9
CCDC7-213ENST00000639290 DENND5AQ6IQ26 1287 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms