RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ITGA3P26006 1051 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 BCL6P41182 706 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 IL2P60568 153 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 MEF2AQ02078 507 aaPredicted RBP16.85■□□□□ 0.29
PNKP-230ENST00000638016 MGAT5Q09328 741 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 Q0VFX4 171 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 TRADDQ15628 312 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 VWA5B1Q5TIE3 1220 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 FAAH2Q6GMR7 532 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 LRRC8EQ6NSJ5 796 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 PRMT9Q6P2P2 845 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 STRA8Q7Z7C7 330 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 PARP9Q8IXQ6 854 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 OR11G2Q8NGC1 345 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 GABPB2Q8TAK5 448 aaPredicted RBP16.85■□□□□ 0.29
PNKP-230ENST00000638016 CPT1CQ8TCG5 803 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 MIEF2Q96C03 454 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 MMABQ96EY8 250 aaPredicted RBP16.85■□□□□ 0.29
PNKP-230ENST00000638016 OR4K3Q96R72 315 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 UNKQ9C0B0 810 aaKnown RBP16.85■□□□□ 0.29
PNKP-230ENST00000638016 MOCS1Q9NZB8 636 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 GRHL1Q9NZI5 618 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 ZFATQ9P243 1243 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 TRPC4Q9UBN4 977 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 ZNF282Q9UDV7 671 aaPredicted RBP16.85■□□□□ 0.29
PNKP-230ENST00000638016 C3orf18Q9UK00 162 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 IGLV3-12A0A075B6K2 115 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 FAM95CA0A1B0GW59 222 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 NPEPPSL1A6NEC2 478 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 CYSRT1A8MQ03 144 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 CXorf49A8MYA2 514 aaPredicted RBP16.84■□□□□ 0.29
PNKP-230ENST00000638016 CDC7O00311 574 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 SLC16A5O15375 505 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 LCMT2O60294 686 aaKnown RBP16.84■□□□□ 0.29
PNKP-230ENST00000638016 DPM1O60762 260 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 ZNF37AP17032 561 aaPredicted RBP16.84■□□□□ 0.29
PNKP-230ENST00000638016 SSTR1P30872 391 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 TAS2R39P59534 338 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 OCA2Q04671 838 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 CEP97Q8IW35 865 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 PALM2Q8IXS6 379 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 OR9A4Q8NGU2 314 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 ZCCHC10Q8TBK6 192 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 SGPP1Q9BX95 441 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 SAYSD1Q9NPB0 183 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 ATP13A2Q9NQ11 1180 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 TMEM184CQ9NVA4 438 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 ARL15Q9NXU5 204 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 RNF14Q9UBS8 474 aa16.84■□□□□ 0.29
PNKP-230ENST00000638016 NXT1Q9UKK6 140 aaKnown RBP16.84■□□□□ 0.29
PNKP-230ENST00000638016 G3BP2Q9UN86 482 aaKnown RBP16.84■□□□□ 0.29
PNKP-230ENST00000638016 CTAGE15A4D2H0 777 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 JRKO75564 520 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 NPPBP16860 134 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 IL1RNP18510 177 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 CASQ1P31415 396 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 SLC26A3P40879 764 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 EEF1A2Q05639 463 aaKnown RBP16.83■□□□□ 0.28
PNKP-230ENST00000638016 AIMP2Q13155 320 aaKnown RBP16.83■□□□□ 0.28
PNKP-230ENST00000638016 DSG2Q14126 1118 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 FRG1Q14331 258 aaKnown RBP16.83■□□□□ 0.28
PNKP-230ENST00000638016 TUBB8Q3ZCM7 444 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 PLEKHN1Q494U1 663 aaPredicted RBP16.83■□□□□ 0.28
PNKP-230ENST00000638016 SBSNQ6UWP8 590 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 CTAGE6Q86UF2 777 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 C17orf64Q86WR6 236 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 ZC3H7AQ8IWR0 971 aaKnown RBP16.83■□□□□ 0.28
PNKP-230ENST00000638016 ANKRD49Q8WVL7 239 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 SCN2AQ99250 2005 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 ERP44Q9BS26 406 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 DRC3Q9H069 523 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 SPNS1Q9H2V7 528 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 ZNF160Q9HCG1 818 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 SEMA3GQ9NS98 782 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 CORO1CQ9ULV4 474 aaPredicted RBP16.83■□□□□ 0.28
PNKP-230ENST00000638016 MAP4K5Q9Y4K4 846 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 PCDHGB7Q9Y5F8 929 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 LRRK2Q5S007 2527 aa16.83■□□□□ 0.28
PNKP-230ENST00000638016 FAM187AA6NFU0 413 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 CELA2AP08217 269 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 GNLYP22749 145 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 GMPRP36959 345 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 EMP3P54852 163 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 ETF1P62495 437 aaKnown RBP16.82■□□□□ 0.28
PNKP-230ENST00000638016 RELAQ04206 551 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 INPP5JQ15735 1006 aaPredicted RBP16.82■□□□□ 0.28
PNKP-230ENST00000638016 PPP1R3AQ16821 1122 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 C18orf21Q32NC0 220 aaPredicted RBP16.82■□□□□ 0.28
PNKP-230ENST00000638016 CATSPEREQ5SY80 951 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 DUPD1Q68J44 220 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 LCTLQ6UWM7 567 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 KCT2Q8NC54 265 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 ZNF740Q8NDX6 193 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 OR56A3Q8NH54 315 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 MOCOSQ96EN8 888 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 C19orf60Q96EN9 201 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 TSNARE1Q96NA8 513 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 MCMBPQ9BTE3 642 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 CAB39LQ9H9S4 337 aa16.82■□□□□ 0.28
PNKP-230ENST00000638016 ESPL1Q14674 2120 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms