RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ILF2Q12905 390 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 ZNF846Q147U1 533 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 INAVAQ3KP66 663 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 ZZZ3Q8IYH5 903 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 IGSF21Q96ID5 467 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 DACH2Q96NX9 599 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 NRTNQ99748 197 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 BRD9Q9H8M2 597 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 TRIM39Q9HCM9 518 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 RAD18Q9NS91 495 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 DNAJC11Q9NVH1 559 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 ZDHHC3Q9NYG2 299 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 CCL26Q9Y258 94 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 WNT9AO14904 365 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 OR56A5P0C7T3 313 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 SRCP12931 536 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 HLA-FP30511 346 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 TMED10P49755 219 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 GAB1Q13480 694 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 COX20Q5RI15 118 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 GAREM2Q75VX8 874 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 RBM12BQ8IXT5 1001 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 FEVQ99581 238 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 RERGLQ9H628 205 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 ACOT13Q9NPJ3 140 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 GPR83Q9NYM4 423 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 LINC00854A0A1B0GVQ3 168 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 FAM227AF5H4B4 570 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 SLC16A6O15403 523 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 ANXA4P09525 319 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 ETFAP13804 333 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 PSMA3P25788 255 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 RPS3AP61247 264 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 CAMK2GQ13555 558 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 DOC2AQ14183 400 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 MAD2L1BPQ15013 274 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 DUOXA1Q1HG43 343 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 LRIF1Q5T3J3 769 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 CYB5D2Q8WUJ1 264 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 GTPBP3Q969Y2 492 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 TMEM169Q96HH4 297 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 SGK2Q9HBY8 427 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 GABRR3A8MPY1 467 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 EFCAB9A8MZ26 197 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 KPNA4O00629 521 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 WBP4O75554 376 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 JRKO75564 520 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 CCDC159P0C7I6 412 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 DNAJA1P31689 397 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 CDH12P55289 794 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 SP3Q02447 781 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 SREBF2Q12772 1141 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 NPRL3Q12980 569 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 DGUOKQ16854 277 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 KDM4DQ6B0I6 523 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 NIPAL1Q6NVV3 410 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 SYTL1Q8IYJ3 562 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 ASB11Q8WXH4 323 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 RDH12Q96NR8 316 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 APOL4Q9BPW4 351 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 SUV39H2Q9H5I1 410 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 MAP4K5Q9Y4K4 846 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 SNX8Q9Y5X2 465 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 TRBV5-4A0A0C4DH59 114 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 NEDD8-MDP1E9PL57 170 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 PDHA2P29803 388 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 RYKP34925 604 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 WNT3P56703 355 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 PFN3P60673 137 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 TPRG1Q6ZUI0 275 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 OTOP2Q7RTS6 562 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 ENTHD1Q8IYW4 607 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 MMP21Q8N119 569 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 SETD9Q8NE22 299 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 OR9Q2Q8NGE9 314 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 MCFD2Q8NI22 146 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 CMTM7Q96FZ5 175 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 COPS4Q9BT78 406 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 DUSP26Q9BV47 211 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 ACAT2Q9BWD1 397 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 VPS29Q9UBQ0 182 aa13.56□□□□□ -0.24
CACNA1A-228ENST00000636610 KCNE1BA0A087WTH5 132 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 GREM1O60565 184 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 GABARAPO95166 117 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 SLC16A8O95907 504 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 STSP08842 583 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 CHRM5P08912 532 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 C1SP09871 688 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 PRPS2P11908 318 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 GADD45AP24522 165 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 CST5P28325 142 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 CTSCP53634 463 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 CRYBA2P53672 197 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 GABARAPL2P60520 117 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 TOP3AQ13472 1001 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 KIAA1614Q5VZ46 1190 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 KLHL17Q6TDP4 642 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 USP45Q70EL2 814 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 TMEM25Q86YD3 366 aa13.55□□□□□ -0.24
CACNA1A-228ENST00000636610 SLC5A8Q8N695 610 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms