RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 CDKL1Q00532 357 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 ATP1A4Q13733 1029 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 SSPNQ14714 243 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 SLMAPQ14BN4 828 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 NKG7Q16617 165 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 PRMT9Q6P2P2 845 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 CEP128Q6ZU80 1094 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 FRA10AC1Q70Z53 315 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 MRGPREQ86SM8 312 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 RELL1Q8IUW5 271 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 ARHGEF39Q8N4T4 335 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 CEP112Q8N8E3 955 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 ABHD11Q8NFV4 315 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 COL26A1Q96A83 441 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 PTERQ96BW5 349 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 MRRFQ96E11 262 aaKnown RBP12.8□□□□□ -0.36
C11orf53-202ENST00000635886 SPSB2Q99619 263 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 EGFL8Q99944 293 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 ING2Q9H160 280 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 SLC26A1Q9H2B4 701 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 ZNF304Q9HCX3 659 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 PCSK5Q92824 1860 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 KALRNO60229 2985 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 CFAP46Q8IYW2 2715 aa12.8□□□□□ -0.36
C11orf53-202ENST00000635886 KCNE1BA0A087WTH5 132 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 MKRN2OSH3BPM6 223 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 K7EM74 188 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 TXNDC9O14530 226 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 LCMT2O60294 686 aaKnown RBP12.79□□□□□ -0.36
C11orf53-202ENST00000635886 CD1DP15813 335 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 PHBP35232 272 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 BCL6P41182 706 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 CCR8P51685 355 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 SNRPNP63162 240 aaKnown RBP12.79□□□□□ -0.36
C11orf53-202ENST00000635886 MEF2AQ02078 507 aaPredicted RBP12.79□□□□□ -0.36
C11orf53-202ENST00000635886 C18orf21Q32NC0 220 aaPredicted RBP12.79□□□□□ -0.36
C11orf53-202ENST00000635886 CATSPEREQ5SY80 951 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 GARNL3Q5VVW2 1013 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 SHISA6Q6ZSJ9 500 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 PPP1R32Q7Z5V6 425 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 CMC1Q7Z7K0 106 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 ZNF605Q86T29 641 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 THOC6Q86W42 341 aaKnown RBP12.79□□□□□ -0.36
C11orf53-202ENST00000635886 SLC5A11Q8WWX8 675 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 THAP11Q96EK4 314 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 UBXN10Q96LJ8 280 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 FMO2Q99518 471 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 MACROD1Q9BQ69 325 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 TSPYL1Q9H0U9 437 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 CDC42EP4Q9H3Q1 356 aaKnown RBP12.79□□□□□ -0.36
C11orf53-202ENST00000635886 SOX17Q9H6I2 414 aaPredicted RBP12.79□□□□□ -0.36
C11orf53-202ENST00000635886 WDR54Q9H977 334 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 ACSS2Q9NR19 701 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 SLC22A14Q9Y267 594 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 TP53TG5Q9Y2B4 290 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 MRPS2Q9Y399 296 aaKnown RBP12.79□□□□□ -0.36
C11orf53-202ENST00000635886 MDC1Q14676 2089 aaKnown RBP12.79□□□□□ -0.36
C11orf53-202ENST00000635886 SPTA1P02549 2419 aa12.79□□□□□ -0.36
C11orf53-202ENST00000635886 CCDC88CQ9P219 2028 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 ZNF462Q96JM2 2506 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 A0A0A6YYC8 382 aaPredicted RBP12.78□□□□□ -0.36
C11orf53-202ENST00000635886 NCF1BA6NI72 391 aaPredicted RBP12.78□□□□□ -0.36
C11orf53-202ENST00000635886 VSTM2BA6NLU5 285 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 NCF1CA8MVU1 366 aaPredicted RBP12.78□□□□□ -0.36
C11orf53-202ENST00000635886 I3L1I5 382 aaPredicted RBP12.78□□□□□ -0.36
C11orf53-202ENST00000635886 FOXS1O43638 330 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 ACSL3O95573 720 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 SLC35E2BP0CK96 405 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 NCF1P14598 390 aaPredicted RBP12.78□□□□□ -0.36
C11orf53-202ENST00000635886 NR1D1P20393 614 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 FBLP22087 321 aaKnown RBP12.78□□□□□ -0.36
C11orf53-202ENST00000635886 GRK3P35626 688 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 HNMTP50135 292 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 CCL11P51671 97 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 ATP6V0D1P61421 351 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 BMPR2Q13873 1038 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 DSG2Q14126 1118 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 CSHL1Q14406 222 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 TGFBIQ15582 683 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 OR4D1Q15615 310 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 LACTB2Q53H82 288 aaPredicted RBP12.78□□□□□ -0.36
C11orf53-202ENST00000635886 RAPH1Q70E73 1250 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 PTRH1Q86Y79 214 aaKnown RBP12.78□□□□□ -0.36
C11orf53-202ENST00000635886 MFSD9Q8NBP5 474 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 OR4K1Q8NGD4 311 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 NEIL2Q969S2 332 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 RHBDF1Q96CC6 855 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 MVB12AQ96EY5 273 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 TSNARE1Q96NA8 513 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 IP6K3Q96PC2 410 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 CYTH2Q99418 400 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 DRC3Q9H069 523 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 ACSS3Q9H6R3 686 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 NXT1Q9UKK6 140 aaKnown RBP12.78□□□□□ -0.36
C11orf53-202ENST00000635886 CDC14AQ9UNH5 594 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 DYRK1BQ9Y463 629 aa12.78□□□□□ -0.36
C11orf53-202ENST00000635886 FASNP49327 2511 aaKnown RBP12.77□□□□□ -0.37
C11orf53-202ENST00000635886 HMX2A2RU54 273 aa12.77□□□□□ -0.37
C11orf53-202ENST00000635886 PEX12O00623 359 aa12.77□□□□□ -0.37
C11orf53-202ENST00000635886 FFAR3O14843 346 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms