RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 HOXD13P35453 343 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 NNMTP40261 264 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 CASP2P42575 452 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 CCR10P46092 362 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 RXRGP48443 463 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 LIG4P49917 911 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 LUMP51884 338 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 MAPK12P53778 367 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 PNLIPRP2P54317 469 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 EIF5P55010 431 aaKnown RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 CDH13P55290 713 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SIRPAP78324 504 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 CX3CL1P78423 397 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 CDK3Q00526 305 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 RUNX1T1Q06455 604 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 EPS8Q12929 822 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 HSPB3Q12988 150 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 PRKG2Q13237 762 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 GPR17Q13304 367 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ITGA9Q13797 1035 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SIM2Q14190 667 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TOMM20Q15388 145 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 MEA1Q16626 185 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 UGP2Q16851 508 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ODF4Q2M2E3 257 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TMEM266Q2M3C6 531 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 C15orf59Q2T9L4 293 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SOWAHCQ53LP3 525 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ELFN2Q5R3F8 820 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 RNASEH2BQ5TBB1 312 aaKnown RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 C20orf194Q5TEA3 1177 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 GPR139Q6DWJ6 353 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 FAM53AQ6NSI3 398 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 PWWP2BQ6NUJ5 590 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 C11orf63Q6NUN7 778 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 MZT2BQ6NZ67 158 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TEX38Q6PEX7 206 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 BHLHB9Q6PI77 547 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 Q6ZSR9 355 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SLC16A9Q7RTY1 509 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ATG9AQ7Z3C6 839 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 HOGA1Q86XE5 327 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 DNAAF5Q86Y56 855 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 PLD3Q8IV08 490 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ARHGAP24Q8N264 748 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF843Q8N446 348 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 POMGNT2Q8NAT1 580 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 OR13C3Q8NGS6 347 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 OR13J1Q8NGT2 312 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 VANGL1Q8TAA9 524 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 GRHL3Q8TE85 626 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TEKT4Q8WW24 435 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 PRPF31Q8WWY3 499 aaKnown RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 IRGQQ8WZA9 623 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 HSD17B8Q92506 261 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SLAMF9Q96A28 289 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF653Q96CK0 615 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SPACA9Q96E40 222 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 GIMAP5Q96F15 307 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SLC47A1Q96FL8 570 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SENP5Q96HI0 755 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SGK494Q96LW2 274 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 DACH2Q96NX9 599 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 AGAP3Q96P47 875 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 MS4A10Q96PG2 267 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 NEK1Q96PY6 1258 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ABHD1Q96SE0 405 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TREX2Q9BQ50 279 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TRIM51Q9BSJ1 452 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 C16orf70Q9BSU1 422 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 CLEC7AQ9BXN2 247 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TRIM15Q9C019 465 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 MMP27Q9H306 513 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 SLC35C2Q9NQQ7 365 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 FAM207AQ9NSI2 230 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 GIMAP4Q9NUV9 329 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 INTS9Q9NV88 658 aaKnown RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ATAD3AQ9NVI7 634 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TAB2Q9NYJ8 693 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 KLHL8Q9P2G9 620 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 B3GAT1Q9P2W7 334 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 CACNG5Q9UF02 275 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 EPHA6Q9UF33 1036 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 LRWD1Q9UFC0 647 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 C19orf25Q9UFG5 118 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 DAPK2Q9UIK4 370 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 OSGIN1Q9UJX0 560 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 RNF150Q9ULK6 438 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TP53TG3Q9ULZ0 132 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 PADI2Q9Y2J8 665 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TMED3Q9Y3Q3 217 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 TMEM184BQ9Y519 407 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 ZHX2Q9Y6X8 837 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 NUP205Q92621 2012 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 PTPRDP23468 1912 aa0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 NUP210Q8TEM1 1887 aaPredicted RBP0.99□□□□□ -2.25
SMARCB1-209ENST00000635578 DOCK8Q8NF50 2099 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 INSRP06213 1382 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 CNTNAP1P78357 1384 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 PCDH11XQ9BZA7 1347 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms