RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 WASHC2DQ5SRD0 308 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 DCST1Q5T197 706 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 OTUD3Q5T2D3 398 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 PLPP4Q5VZY2 271 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 TRAT1Q6PIZ9 186 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 PET117Q6UWS5 81 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 B3GNT6Q6ZMB0 384 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 C15orf39Q6ZRI6 1047 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF367Q7RTV3 350 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 TRAPPC11Q7Z392 1133 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 DNAJB7Q7Z6W7 309 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CCDC190Q86UF4 302 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 IQCHQ86VS3 1027 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CEP57Q86XR8 500 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 GPR65Q8IYL9 337 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 TTC30BQ8N4P2 665 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 SUMF1Q8NBK3 374 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 RBM15BQ8NDT2 890 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CSNK2A3Q8NEV1 391 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CTCFLQ8NI51 663 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 EXOC6Q8TAG9 804 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 SETD6Q8TBK2 473 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 TAS1R2Q8TE23 839 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CASP10Q92851 521 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 MED30Q96HR3 178 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 IGSF21Q96ID5 467 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 LINC00615Q96LM1 132 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 NLRP4Q96MN2 994 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 JAKMIP1Q96N16 626 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF830Q96NB3 372 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF558Q96NG5 402 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 LRFN5Q96NI6 719 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 HAUS8Q9BT25 410 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 HGH1Q9BTY7 390 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 MMTAG2Q9BU76 263 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 NUP85Q9BW27 656 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 ISCUQ9H1K1 167 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CATSPERBQ9H7T0 1116 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 MINDY3Q9H8M7 445 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 ANKZF1Q9H8Y5 726 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 XAB2Q9HCS7 855 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 SIRT3Q9NTG7 399 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 AGPAT5Q9NUQ2 364 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 TBC1D13Q9NVG8 400 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 MARCH5Q9NX47 278 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 EPS15L1Q9UBC2 864 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 IL36RNQ9UBH0 155 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 STK39Q9UEW8 545 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 RASAL2Q9UJF2 1139 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CDC14AQ9UNH5 594 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 TMEM184BQ9Y519 407 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 ZFP37Q9Y6Q3 630 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CNOT1A5YKK6 2376 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 FASNP49327 2511 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 GREB1Q4ZG55 1949 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 TICRRQ7Z2Z1 1910 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 TNRC6BQ9UPQ9 1833 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 TRIP11Q15643 1979 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 UBR5O95071 2799 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 ANK1P16157 1881 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 DENND4CQ5VZ89 1909 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 PLXND1Q9Y4D7 1925 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 TMEM272A0A1B0GTI8 110 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 MED19A0JLT2 244 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 ERICH2A1L162 156 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 DENND3A2RUS2 1198 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 TMEM150BA6NC51 233 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 ANHXE9PGG2 379 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 CCDC188H7C350 402 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 J3KR12 359 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 M0QZ92 97 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 ACOT8O14734 319 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 PSMA7O14818 248 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 MSH4O15457 936 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 KCNN4O15554 427 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 NDUFS4O43181 175 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SLC7A4O43246 635 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SPINT2O43291 252 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 HSPA12AO43301 675 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SPRY1O43609 319 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 PLPP2O43688 288 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 PI15O43692 258 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 ITM2AO43736 263 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 ZIC3O60481 467 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SYNCRIPO60506 623 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 PRAMEF11O60813 436 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 CREG1O75629 220 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 ZWINTO95229 277 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SIX3O95343 332 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 TRUB2O95900 331 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 EGFP01133 1207 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 LINGO3P0C6S8 592 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 PFKFB1P16118 471 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 NAGAP17050 411 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 UGT1A1P22309 533 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 ATP5DP30049 168 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 HOXA9P31269 272 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 STX2P32856 288 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 APOBEC1P41238 236 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 CCR10P46092 362 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms