RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 AGTRAPQ6RW13 159 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 LPCAT2Q7L5N7 544 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 THOC6Q86W42 341 aaKnown RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PTRH1Q86Y79 214 aaKnown RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 TRAPPC5Q8IUR0 188 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 KBTBD2Q8IY47 623 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 CCDC116Q8IYX3 515 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 LIX1Q8N485 282 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 ZBTB8BQ8NAP8 495 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 OR8J3Q8NGG0 315 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 DNAJB14Q8TBM8 379 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 CSGALNACT1Q8TDX6 532 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 REPS1Q96D71 796 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 HIC2Q96JB3 615 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 RIPOR3Q96MK2 946 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 FRG2BQ96QU4 278 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 DPEP2Q9H4A9 486 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 RMND5AQ9H871 391 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 NANOGQ9H9S0 305 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 PRSS16Q9NQE7 514 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 SCOCQ9UIL1 159 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 MBD1Q9UIS9 605 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-230ENST00000634433 RIMS3Q9UJD0 308 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 FADS3Q9Y5Q0 445 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 SNX13Q9Y5W8 968 aa6.93□□□□□ -1.3
BRCA1-230ENST00000634433 C9JVG2 144 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 SPINT1O43278 529 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 MYO1DO94832 1006 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 ADH1BP00325 375 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 CAPNS1P04632 268 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 FCGR1AP12314 374 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 BCKDHAP12694 445 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 EPORP19235 508 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 PSMA4P25789 261 aaKnown RBP6.92□□□□□ -1.3
BRCA1-230ENST00000634433 IDUAP35475 653 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 PBX2P40425 430 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 P2RY2P41231 377 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 GRIA3P42263 894 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 IL12RB1P42701 662 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 TNFRSF4P43489 277 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 CLCN2P51788 898 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 ATXN3P54252 364 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-230ENST00000634433 CLDN8P56748 225 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 PFN3P60673 137 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 HMGCS1Q01581 520 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 LIPEQ05469 1076 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 RPA4Q13156 261 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 NAE1Q13564 534 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 MAPKAPK3Q16644 382 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 LRRC36Q1X8D7 754 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 JMJD6Q6NYC1 403 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-230ENST00000634433 NEK5Q6P3R8 708 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 ADAMTSL4Q6UY14 1074 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 MSANTD1Q6ZTZ1 278 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 CFAP206Q8IYR0 622 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 OR56A3Q8NH54 315 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 HM13Q8TCT9 377 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 SLC13A3Q8WWT9 602 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 STARD8Q92502 1023 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 MTFMTQ96DP5 389 aaKnown RBP6.92□□□□□ -1.3
BRCA1-230ENST00000634433 CGREF1Q99674 301 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 PKP2Q99959 881 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 TRMT61BQ9BVS5 477 aaKnown RBP6.92□□□□□ -1.3
BRCA1-230ENST00000634433 ACPTQ9BZG2 426 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 ATG10Q9H0Y0 220 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 OR2AG1Q9H205 316 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 CLMPQ9H6B4 373 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 PLSCR4Q9NRQ2 329 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 FARSBQ9NSD9 589 aaKnown RBP6.92□□□□□ -1.3
BRCA1-230ENST00000634433 CCM2LQ9NUG4 571 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-230ENST00000634433 STOX2Q9P2F5 926 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-230ENST00000634433 RAB26Q9ULW5 256 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 EDARQ9UNE0 448 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 COQ6Q9Y2Z9 468 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 MAP4K5Q9Y4K4 846 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 KCNE2Q9Y6J6 123 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 ASPDHA6ND91 283 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 FAM86C2PA6NEL3 165 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 M0QX08 132 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 PLOD2O00469 737 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 ITPKAP23677 461 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 GDI1P31150 447 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 PIK3CBP42338 1070 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 GSK3BP49841 420 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 RPS14P62263 151 aaKnown RBP6.92□□□□□ -1.3
BRCA1-230ENST00000634433 LRRC74AQ0VAA2 488 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 MESP2Q0VG99 397 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 CCDC85BQ15834 202 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-230ENST00000634433 C11orf91Q3C1V1 193 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 USP39Q53GS9 565 aaKnown RBP6.92□□□□□ -1.3
BRCA1-230ENST00000634433 SFT2D3Q587I9 215 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 XKR6Q5GH73 641 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 MTX3Q5HYI7 312 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 GRHL2Q6ISB3 625 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 CAPN13Q6MZZ7 669 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-230ENST00000634433 SYCE2Q6PIF2 218 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 CYP2R1Q6VVX0 501 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 SPDYE1Q8NFV5 336 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-230ENST00000634433 OR2L2Q8NH16 312 aa6.92□□□□□ -1.3
BRCA1-230ENST00000634433 SETD7Q8WTS6 366 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms