RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 RFX8Q6ZV50 586 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 BZW1Q7L1Q6 419 aaKnown RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 SGCZQ96LD1 299 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 NSMCE3Q96MG7 304 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 PTCHD1Q96NR3 888 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 MECRQ9BV79 373 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 CADM1Q9BY67 442 aaKnown RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 STN1Q9H668 368 aaKnown RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 DENND2DQ9H6A0 471 aaPredicted RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 DONSONQ9NYP3 566 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 MYO7BQ6PIF6 2116 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 MAP1AP78559 2803 aaPredicted RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 FAM237BA0A1B0GVD1 139 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 PDZK1P1A8MUH7 402 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 K7EM74 188 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 FCHO1O14526 889 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 CCDC22O60826 627 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 ZNF189O75820 626 aaPredicted RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 IL33O95760 270 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 ALDOAP04075 364 aaKnown RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 MYL2P10916 166 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 GP1BBP13224 206 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 AMD1P17707 334 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 PGAM1P18669 254 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 CR2P20023 1033 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 CALB2P22676 271 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 ARL4AP40617 200 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 HALP42357 657 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 SUOXP51687 545 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 AIF1P55008 147 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 NRG1Q02297 640 aaPredicted RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 CDC20Q12834 499 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 TRAF2Q12933 501 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 FOXD4Q12950 439 aaPredicted RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 CRYMQ14894 314 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 ARMC12Q5T9G4 340 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 ATG16L1Q676U5 607 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 PACS1Q6VY07 963 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 DPPA4Q7L190 304 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 TIPARPQ7Z3E1 657 aaKnown RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 RASGRP3Q8IV61 690 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 TRIM48Q8IWZ4 208 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 BBS5Q8N3I7 341 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 ATPAF2Q8N5M1 289 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 NSL1Q96IY1 281 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 TGM7Q96PF1 710 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 TUBGCP5Q96RT8 1024 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 MYCBPQ99417 103 aaPredicted RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 AGAP2Q99490 1192 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 BTBD10Q9BSF8 475 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 RIOK2Q9BVS4 552 aaKnown RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 JAM3Q9BX67 310 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 C20orf27Q9GZN8 174 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 NMUR2Q9GZQ4 415 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 IQCGQ9H095 443 aaKnown RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 MMADHCQ9H3L0 296 aaPredicted RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 PCMTD2Q9NV79 361 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 TRNAU1APQ9NX07 287 aaKnown RBP4.7□□□□□ -1.66
LINC00550-201ENST00000629293 ZNF69Q9UC07 566 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 ANAPC2Q9UJX6 822 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 PILRAQ9UKJ1 303 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 ACSL6Q9UKU0 697 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 POLHQ9Y253 713 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 MAN2B2Q9Y2E5 1009 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 MAD1L1Q9Y6D9 718 aa4.7□□□□□ -1.66
LINC00550-201ENST00000629293 ZGRF1Q86YA3 2104 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 SDR42E2A6NKP2 422 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 MKRN2OSH3BPM6 223 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 DIAPH2O60879 1101 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 VPS4BO75351 444 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PDHA1P08559 390 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 THRAP10827 490 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 VIPR1P32241 457 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 GCKP35557 465 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 DLSTP36957 453 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 NDST2P52849 883 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 GFERP55789 205 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 AP1S1P61966 158 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 SARNPP82979 210 aaKnown RBP4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PDK1Q15118 436 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 CHI3L2Q15782 390 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 ZNF648Q5T619 568 aaPredicted RBP4.69□□□□□ -1.66
LINC00550-201ENST00000629293 LRRC66Q68CR7 880 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 USP45Q70EL2 814 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 TMEM135Q86UB9 458 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 KLHDC8BQ8IXV7 354 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 NDUFAF2Q8N183 169 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 ZNF567Q8N184 647 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 FAM26EQ8N5C1 309 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 OR4D9Q8NGE8 314 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 DTD2Q96FN9 168 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 ZNF778Q96MU6 729 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 NAT9Q9BTE0 207 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 SLC17A6Q9P2U8 582 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 KCND3Q9UK17 655 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 VPS4AQ9UN37 437 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PCDHGB3Q9Y5G1 929 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 ZFHX3Q15911 3703 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 GSC2O15499 205 aa4.69□□□□□ -1.66
LINC00550-201ENST00000629293 PIRTP0C851 137 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms