RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 YBX1P67809 324 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 CYP4F3Q08477 520 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 SF3A2Q15428 464 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 LRRC36Q1X8D7 754 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 TBC1D21Q8IYX1 336 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 EME1Q96AY2 570 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 CAMK1GQ96NX5 476 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 CD300AQ9UGN4 299 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 VILLO15195 856 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 ULK1O75385 1050 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 LDOC1O95751 146 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 UBTFL6P0CB48 400 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 UQCRBP14927 111 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 ENGP17813 658 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 TCN1P20061 433 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 SH3BP2P78314 561 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 GTF2H2Q13888 395 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 FZD2Q14332 565 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 GTF2H2CQ6P1K8 395 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 PQLC1Q8N2U9 271 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 RNF31Q96EP0 1072 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 BIRC8Q96P09 236 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 ATOH8Q96SQ7 321 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 HBEGFQ99075 208 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 SLC30A3Q99726 388 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 HOPXQ9BPY8 73 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 PCBD2Q9H0N5 130 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 C6orf203Q9P0P8 240 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 C17orf113A0A1B0GUU1 675 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 SLC16A8O95907 504 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 PROS1P07225 676 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 HGFP14210 728 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 DDX5P17844 614 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 SP140Q13342 867 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 NR0B2Q15466 257 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 RPE65Q16518 533 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 LMNTD1Q8N9Z9 388 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 FNDC5Q8NAU1 212 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 GPR156Q8NFN8 814 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 LRFN3Q9BTN0 628 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 ZDHHC5Q9C0B5 715 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 VCX3AQ9NNX9 186 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 SPACA6W5XKT8 324 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 K7EPI3 171 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 YKT6O15498 198 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 STATHP02808 62 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 UROSP10746 265 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 TRIM23P36406 574 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 HNMTP50135 292 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 PNLIPRP1P54315 467 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 C6orf10Q5SRN2 563 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 LAIR1Q6GTX8 287 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 ANGPTL8Q6UXH0 198 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 FAM92BQ6ZTR7 304 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 IQCHQ86VS3 1027 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 VRK3Q8IV63 474 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 SLCO4A1Q96BD0 722 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 HAUS8Q9BT25 410 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 TUBB1Q9H4B7 451 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 SPAG4Q9NPE6 437 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 SNX6Q9UNH7 406 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 BTRCQ9Y297 605 aa12.03□□□□□ -0.48
SYNGAP1-207ENST00000628646 AHCTF1Q8WYP5 2266 aa12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 RNF103-CHMP3A0A140T963 221 aa12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 LRRC14BA6NHZ5 514 aa12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 STX16O14662 325 aa12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 ENO2P09104 434 aaPredicted RBP12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 MTHFD1P11586 935 aaKnown RBP12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 RAB28P51157 221 aa12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 PHKG1Q16816 387 aa12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 UNC5DQ6UXZ4 953 aa12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 ZNF548Q8NEK5 533 aaPredicted RBP12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 SLC37A2Q8TED4 501 aa12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 ZDHHC12Q96GR4 267 aa12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 AHSPQ9NZD4 102 aa12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 MBD1Q9UIS9 605 aaPredicted RBP12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 TIMM22Q9Y584 194 aa12.02□□□□□ -0.48
SYNGAP1-207ENST00000628646 CNTRLQ7Z7A1 2325 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 GNGT2O14610 69 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 FCGR1AP12314 374 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 MYF5P13349 255 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 FOXA1P55317 472 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 RGS1Q08116 209 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 TLR1Q15399 786 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 CLEC6AQ6EIG7 209 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 THOC6Q86W42 341 aaKnown RBP12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 TMEM126BQ8IUX1 230 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 FAM156AQ8NDB6 213 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 TWIST2Q8WVJ9 160 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 NAT6Q93015 286 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 UBAP1Q9NZ09 502 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 PDP2Q9P2J9 529 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 LEF1Q9UJU2 399 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 PDE10AQ9Y233 779 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 SEC16AO15027 2179 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 RP1L1Q8IWN7 2480 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 C4orf47A7E2U8 309 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 C2orf74A8MZ97 194 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 SLC28A1O00337 649 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 MLLT3P42568 568 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms