RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 MEF2AQ02078 507 aaPredicted RBP9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 CSTF1Q05048 431 aaKnown RBP9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 SRSF5Q13243 272 aaKnown RBP9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 LAPTM5Q13571 262 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 DDX39BQ13838 428 aaKnown RBP9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 CYLC2Q14093 348 aaPredicted RBP9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 RPS6KA2Q15349 733 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 GSTA3Q16772 222 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 HIST2H2ACQ16777 129 aaPredicted RBP9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 RFTN2Q52LD8 501 aaPredicted RBP9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 AGKQ53H12 422 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 PRRT3Q5FWE3 981 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 PAGE2BQ5JRK9 111 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 IL23RQ5VWK5 629 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 HIST2H2AA3Q6FI13 130 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 ADNP2Q6IQ32 1131 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 MED27Q6P2C8 311 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 LRRC69Q6ZNQ3 347 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 LONP2Q86WA8 852 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 AMIGO1Q86WK6 493 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 C1orf210Q8IVY1 113 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 SFTPA2Q8IWL1 248 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 TRIM48Q8IWZ4 208 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 MIER2Q8N344 545 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 OR7G3Q8NG95 312 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 OR4E2Q8NGC2 313 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 OR9I1Q8NGQ6 314 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 FBXO27Q8NI29 283 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 RP9Q8TA86 221 aaKnown RBP9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 LCN9Q8WX39 176 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 REPS1Q96D71 796 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 HSH2DQ96JZ2 352 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 BTBD10Q9BSF8 475 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 EHD1Q9H4M9 534 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 RUBCNLQ9H714 662 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 PELI2Q9HAT8 420 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 CUEDC1Q9NWM3 386 aaPredicted RBP9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 C1orf109Q9NX04 203 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 CCDC167Q9P0B6 97 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 POLR3HQ9Y535 204 aaPredicted RBP9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 GPR45Q9Y5Y3 372 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 ABCA7Q8IZY2 2146 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 FANCMQ8IYD8 2048 aa9.56□□□□□ -0.88
SOX2-OT-244ENST00000627738 KIR2DS5A0A0G2JLQ3 304 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 A0A0G2JNG1 304 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 A0A1W2PNR3 127 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 CFAP73A6NFT4 308 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 OR5K4A6NMS3 321 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 KIR2DS3K7RE56 304 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 VILLO15195 856 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 BCAT2O15382 392 aaPredicted RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 GYG2O15488 501 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 PRICKLE3O43900 615 aaPredicted RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 SEC22BO75396 215 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 VSIG8P0DPA2 414 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 G6PDP11413 515 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 EZRP15311 586 aaKnown RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 NQO1P15559 274 aaKnown RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 XRCC1P18887 633 aaPredicted RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 PRPH2P23942 346 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 PEBP1P30086 187 aaKnown RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 SHMT2P34897 504 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 MRPL19P49406 292 aaKnown RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 ACADVLP49748 655 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 CCR8P51685 355 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 MNAT1P51948 309 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 KCNJ2P63252 427 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 UBE2IP63279 158 aaKnown RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 IRX1P78414 480 aaPredicted RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 ZNF33BQ06732 778 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 CSTF3Q12996 717 aaKnown RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 MAD2L1Q13257 205 aaPredicted RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 CUL3Q13618 768 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 KIR2DS5Q14953 304 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 PLCL1Q15111 1095 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 ELOCQ15369 112 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 MAPRE2Q15555 327 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 SMU1Q2TAY7 513 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 PDCD4Q53EL6 469 aaKnown RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 ICE2Q659A1 982 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 ZFAND4Q86XD8 727 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 FAM129CQ86XR2 697 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 FUNDC1Q8IVP5 155 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 LAS2Q8IYD9 372 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 MAML2Q8IZL2 1156 aaPredicted RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 NAGSQ8N159 534 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 KRT78Q8N1N4 520 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 TMEM105Q8N8V8 129 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 RBM15BQ8NDT2 890 aaKnown RBP9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 ZNF740Q8NDX6 193 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 FAM46DQ8NEK8 389 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 OR2A1Q8NGT9 310 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 HUS1BQ8NHY5 278 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 LMX1AQ8TE12 382 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 SLC37A2Q8TED4 501 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 UBE2E3Q969T4 207 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 CMTM7Q96FZ5 175 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 APIPQ96GX9 242 aa9.55□□□□□ -0.88
SOX2-OT-244ENST00000627738 SLC45A3Q96JT2 553 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms