RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 A0A0A6YYC8 382 aaPredicted RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 SPAARA0A1B0GVQ0 90 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 MCIDASD6RGH6 385 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 I3L1I5 382 aaPredicted RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 TNFSF15O95150 251 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 HLA-DQA2P01906 255 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 BPGMP07738 259 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 NR2F6P10588 404 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 ALOX12P18054 663 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 SLC6A2P23975 617 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 CRHR1P34998 444 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 RPL4P36578 427 aaKnown RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 LTBRP36941 435 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 CATSPEREQ5SY80 951 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 C2CD4AQ8NCU7 369 aaPredicted RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 WDR36Q8NI36 951 aaKnown RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 NSL1Q96IY1 281 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 GRHL1Q9NZI5 618 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 ANKMY1Q9P2S6 941 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 PLLPQ9Y342 182 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 COL6A6A6NMZ7 2263 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 FAM220BPB1ANY3 271 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 SLC22A3O75751 556 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 C1GALT1C1LP0DN25 315 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 COL9A1P20849 921 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 ATP6V1B2P21281 511 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 RPE65Q16518 533 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 BNC2Q6ZN30 1099 aaPredicted RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 COMMD2Q86X83 199 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 MCATQ8IVS2 390 aaKnown RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 SFTPA1Q8IWL2 248 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 AADATQ8N5Z0 425 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 ARL10Q8N8L6 244 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 ATG16L2Q8NAA4 619 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 FCRL3Q96P31 734 aaPredicted RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 EPN3Q9H201 632 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 IL37Q9NZH6 218 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 NOP53Q9NZM5 478 aaKnown RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 ZNF180Q9UJW8 692 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 UTS2RQ9UKP6 389 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 SLC9A8Q9Y2E8 581 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 TEX264Q9Y6I9 313 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 IGHV1OR15-9A0A0B4J2B8 117 aa8.77□□□□□ -1
HDAC9-229ENST00000622668 A0A0J9YY10 115 aa8.77□□□□□ -1
HDAC9-229ENST00000622668 RTCAO00442 366 aaKnown RBP8.77□□□□□ -1
HDAC9-229ENST00000622668 BMP1P13497 986 aa8.77□□□□□ -1
HDAC9-229ENST00000622668 GGT5P36269 586 aa8.77□□□□□ -1
HDAC9-229ENST00000622668 RPS15AP62244 130 aaKnown RBP8.77□□□□□ -1
HDAC9-229ENST00000622668 AP2B1P63010 937 aa8.77□□□□□ -1
HDAC9-229ENST00000622668 ADGRD1Q6QNK2 874 aa8.77□□□□□ -1
HDAC9-229ENST00000622668 DGLUCYQ7Z3D6 616 aa8.77□□□□□ -1
HDAC9-229ENST00000622668 EXOC3L1Q86VI1 746 aa8.77□□□□□ -1
HDAC9-229ENST00000622668 PGBD5Q8N414 524 aa8.77□□□□□ -1
HDAC9-229ENST00000622668 INSM2Q96T92 566 aaPredicted RBP8.77□□□□□ -1
HDAC9-229ENST00000622668 TAPBPLQ9BX59 468 aa8.77□□□□□ -1
HDAC9-229ENST00000622668 OR6C2Q9NZP2 312 aa8.77□□□□□ -1
HDAC9-229ENST00000622668 LEF1Q9UJU2 399 aaPredicted RBP8.77□□□□□ -1
HDAC9-229ENST00000622668 AP1M2Q9Y6Q5 423 aa8.77□□□□□ -1
HDAC9-229ENST00000622668 KRBA1A5PL33 1030 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 FAM149AA5PLN7 773 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 H3BN98 237 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 K7ESM1 405 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 SIGLEC6O43699 453 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 PSMA4P25789 261 aaKnown RBP8.77□□□□□ -1.01
HDAC9-229ENST00000622668 OR1D4P47884 311 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 CASP9P55211 416 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 MRPS22P82650 360 aaKnown RBP8.77□□□□□ -1.01
HDAC9-229ENST00000622668 MC1RQ01726 317 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 KIR2DS3Q14952 304 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 LRRC36Q1X8D7 754 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 NIPAL1Q6NVV3 410 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 ZYG11AQ6WRX3 759 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 LUZP2Q86TE4 346 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 PDZD3Q86UT5 571 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 ETFBKMTQ8IXQ9 262 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 FAM47BQ8NA70 645 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 KYQ8NBH2 561 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 OR2L2Q8NH16 312 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 B4GALNT2Q8NHY0 566 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 DTX3LQ8TDB6 740 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 KIAA1191Q96A73 305 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 TADA1Q96BN2 335 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 ITCHQ96J02 903 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 F2RL3Q96RI0 385 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 FAM129BQ96TA1 746 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 GPR22Q99680 433 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 FUT8Q9BYC5 575 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 DERL2Q9GZP9 239 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 MRM3Q9HC36 420 aaKnown RBP8.77□□□□□ -1.01
HDAC9-229ENST00000622668 STOX2Q9P2F5 926 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-229ENST00000622668 SEC14L3Q9UDX4 400 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 SERGEFQ9UGK8 458 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 ADGRE2Q9UHX3 823 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 CDC14CA4D256 554 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 FCHO1O14526 889 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 GABBR2O75899 941 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 IDO1P14902 403 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 GPR18Q14330 331 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 TMEM52BQ4KMG9 183 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 TNFAIP8L2Q6P589 184 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms