RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 OR4K1Q8NGD4 311 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 SELENOMQ8WWX9 145 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 NCSTNQ92542 709 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 REPS1Q96D71 796 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 PPM1MQ96MI6 270 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 ABCG4Q9H172 646 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 EPB41L1Q9H4G0 881 aa17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 WDR55Q9H6Y2 383 aaPredicted RBP17.12■□□□□ 0.33
PTCHD3-202ENST00000622555 A0A0J9YY10 115 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 SDHDO14521 159 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 CDX4O14627 284 aaPredicted RBP17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 FLRT2O43155 660 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 B4GAT1O43505 415 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 DUX1O43812 170 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 LRP3O75074 770 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 PDYNP01213 254 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 PNLIPP16233 465 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 EPHA3P29320 983 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 GRK3P35626 688 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 ACTN3Q08043 901 aaPredicted RBP17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 DDX39BQ13838 428 aaKnown RBP17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 RBBP5Q15291 538 aaKnown RBP17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 SPRED3Q2MJR0 410 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 PROX2Q3B8N5 592 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 TMIGD1Q6UXZ0 262 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 TRPM8Q7Z2W7 1104 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 SPRED1Q7Z699 444 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 OR7G3Q8NG95 312 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 USP7Q93009 1102 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 NAT6Q93015 286 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 UBE2E3Q969T4 207 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 C3orf30Q96M34 536 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 RILPQ96NA2 401 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 TMEM9BQ9NQ34 198 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 RXFP3Q9NSD7 469 aa17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 APOBEC2Q9Y235 224 aaKnown RBP17.11■□□□□ 0.33
PTCHD3-202ENST00000622555 ATP6AP2A0A1C7CYW4 349 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 FEZF1A0PJY2 475 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 EME2A4GXA9 379 aaPredicted RBP17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 ZW10O43264 779 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 NRP2O60462 931 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 ATP6AP2O75787 350 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 CKMT1AP12532 417 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 PVRP15151 417 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 MAGP20916 626 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 LSSP48449 732 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 DUSP3P51452 185 aaPredicted RBP17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 GPLD1P80108 840 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 PERM1Q5SV97 790 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 ZNF425Q6IV72 752 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 DBX2Q6ZNG2 339 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 ACAD11Q709F0 780 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 LAS2Q8IYD9 372 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 WDR20Q8TBZ3 569 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 RHBDD1Q8TEB9 315 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 CCT7Q99832 543 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 PITHD1Q9GZP4 211 aaPredicted RBP17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 KLHL25Q9H0H3 589 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 PARD6AQ9NPB6 346 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 EVA1BQ9NVM1 165 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 FRYLO94915 3013 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 HAT1O14929 419 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 CAPN5O15484 640 aaPredicted RBP17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 OR1F1O43749 312 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 CDH3P22223 829 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 SLC14A1Q13336 389 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 NAA25Q14CX7 972 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 GALNTL6Q49A17 601 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 AASDHQ4L235 1098 aaPredicted RBP17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 XKR7Q5GH72 579 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 NXNQ6DKJ4 435 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 ADNP2Q6IQ32 1131 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 FIGLAQ6QHK4 219 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 FAM92BQ6ZTR7 304 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 PLD3Q8IV08 490 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 TBC1D19Q8N5T2 526 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 TGM7Q96PF1 710 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 OR52B2Q96RD2 323 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 MTERF1Q99551 399 aaKnown RBP17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 TCF7L2Q9NQB0 619 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 RIC8BQ9NVN3 520 aa17.1■□□□□ 0.33
PTCHD3-202ENST00000622555 TRBC2A0A5B9 178 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 SLC28A1O00337 649 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 TNFSF14O43557 240 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 GFERP55789 205 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 IMPG1Q17R60 797 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 RNF165Q6ZSG1 346 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 PAQR7Q86WK9 346 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 C10orf67Q8IYJ2 551 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 RNF175Q8N4F7 328 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 OR2T11Q8NH01 316 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 HUS1BQ8NHY5 278 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 TUBGCP3Q96CW5 907 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 ZDHHC12Q96GR4 267 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 MAELQ96JY0 434 aaKnown RBP17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 CNDP2Q96KP4 475 aaKnown RBP17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 RAB33BQ9H082 229 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 SEMA6CQ9H3T2 930 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 NT5DC2Q9H857 520 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms