RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SNAPC1Q16533 368 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 ZNF74Q16587 644 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 CBWD6Q4V339 395 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 CBWD3Q5JTY5 395 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 GPR139Q6DWJ6 353 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 NUP54Q7Z3B4 507 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 PRPF39Q86UA1 669 aaKnown RBP3.61□□□□□ -1.83
BRCA1-229ENST00000621897 ZNF619Q8N2I2 560 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 GOT1L1Q8NHS2 421 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-229ENST00000621897 MAPK15Q8TD08 544 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 MIPOL1Q8TD10 442 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 ZNF606Q8WXB4 792 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 TAF4BQ92750 862 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 CNDP2Q96KP4 475 aaKnown RBP3.61□□□□□ -1.83
BRCA1-229ENST00000621897 PRMT7Q9NVM4 692 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-229ENST00000621897 HPF1Q9NWY4 346 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 GDE1Q9NZC3 331 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 CTNNA3Q9UI47 895 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 MUTYHQ9UIF7 546 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 ZFP37Q9Y6Q3 630 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-229ENST00000621897 A0A1W2PPM1 405 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 NEMP2A6NFY4 417 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 CCDC69A6NI79 296 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 SLC7A4O43246 635 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 KIF5CO60282 957 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 GOSR1O95249 250 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 PGM3O95394 542 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 SLC4A1P02730 911 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 NR2F1P10589 423 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 SFTPCP11686 197 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 CD151P48509 253 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 IFI35P80217 286 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-229ENST00000621897 TFCP2Q12800 502 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 RASA2Q15283 850 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 MOGAT2Q3SYC2 334 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 LYSMD4Q5XG99 296 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 IRGCQ6NXR0 463 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 ALKBH5Q6P6C2 394 aaKnown RBP3.6□□□□□ -1.83
BRCA1-229ENST00000621897 C11orf88Q6PI97 169 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 CCBE1Q6UXH8 406 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-229ENST00000621897 KIF6Q6ZMV9 814 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 CCDC91Q7Z6B0 441 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 UNC45BQ8IWX7 931 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 OR8H3Q8N146 312 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 PTERQ96BW5 349 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 THOC1Q96FV9 657 aaKnown RBP3.6□□□□□ -1.83
BRCA1-229ENST00000621897 RBM18Q96H35 190 aaKnown RBP3.6□□□□□ -1.83
BRCA1-229ENST00000621897 ABHD1Q96SE0 405 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 OR10A4Q9H209 315 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 TLE6Q9H808 572 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.6□□□□□ -1.83
BRCA1-229ENST00000621897 RABL2AQ9UBK7 228 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-229ENST00000621897 DUSP12Q9UNI6 340 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 SNX8Q9Y5X2 465 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 CSNK1G3Q9Y6M4 447 aa3.6□□□□□ -1.83
BRCA1-229ENST00000621897 ARID2Q68CP9 1835 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 A0A1W2PPQ1 181 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 GLOD5A6NK44 160 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 SNURFLB1AK76 121 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 ARPC2O15144 300 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 APBB3O95704 486 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 IGHEP01854 428 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 QDPRP09417 244 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 EEF2P13639 858 aaKnown RBP3.59□□□□□ -1.83
BRCA1-229ENST00000621897 PFKFB1P16118 471 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 CD27P26842 260 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 PTGER4P35408 488 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 CCR10P46092 362 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 XGP55808 180 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 PAX8Q06710 450 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 HSPB3Q12988 150 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 STK4Q13043 487 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 EFTUD2Q15029 972 aaKnown RBP eCLIP3.59□□□□□ -1.83
BRCA1-229ENST00000621897 MFSD12Q6NUT3 480 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 C16orf87Q6PH81 154 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 LEKR1Q6ZMV7 388 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 NUP37Q8NFH4 326 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 OR10Q1Q8NGQ4 319 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 C4orf45Q96LM5 186 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 CCDC43Q96MW1 224 aaKnown RBP3.59□□□□□ -1.83
BRCA1-229ENST00000621897 ZNF830Q96NB3 372 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-229ENST00000621897 MXD3Q9BW11 206 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 MRPL1Q9BYD6 325 aaKnown RBP3.59□□□□□ -1.83
BRCA1-229ENST00000621897 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.59□□□□□ -1.83
BRCA1-229ENST00000621897 TEX10Q9NXF1 929 aaPredicted RBP3.59□□□□□ -1.83
BRCA1-229ENST00000621897 HOXC10Q9NYD6 342 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 MRPL15Q9P015 296 aaKnown RBP3.59□□□□□ -1.83
BRCA1-229ENST00000621897 RNF150Q9ULK6 438 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 WDR83OSQ9Y284 106 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 R4GN57 208 aa3.59□□□□□ -1.83
BRCA1-229ENST00000621897 GUCA1CO95843 209 aa3.58□□□□□ -1.84
BRCA1-229ENST00000621897 KRT13P13646 458 aa3.58□□□□□ -1.84
BRCA1-229ENST00000621897 PRPHP41219 470 aa3.58□□□□□ -1.84
BRCA1-229ENST00000621897 TMEM50BP56557 158 aa3.58□□□□□ -1.84
BRCA1-229ENST00000621897 RBP5P82980 135 aa3.58□□□□□ -1.84
BRCA1-229ENST00000621897 IL1RL1Q01638 556 aa3.58□□□□□ -1.84
BRCA1-229ENST00000621897 MAP2K1Q02750 393 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-229ENST00000621897 AP1B1Q10567 949 aa3.58□□□□□ -1.84
BRCA1-229ENST00000621897 RIGQ13278 110 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms