RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 TGIF1Q15583 401 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 TIPARPQ7Z3E1 657 aaKnown RBP17.77■□□□□ 0.44
CIRBP-245ENST00000621399 CROCCP2Q86T23 111 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 DTX1Q86Y01 620 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 SRRM1Q8IYB3 904 aaKnown RBP17.77■□□□□ 0.44
CIRBP-245ENST00000621399 NLGN4XQ8N0W4 816 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 TBC1D19Q8N5T2 526 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 TEX9Q8N6V9 391 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 NLGN4YQ8NFZ3 816 aaPredicted RBP17.77■□□□□ 0.44
CIRBP-245ENST00000621399 ZBTB9Q96C00 473 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 ZNF285Q96NJ3 590 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 AIF1LQ9BQI0 150 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 NDC1Q9BTX1 674 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 CENPHQ9H3R5 247 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 ARGLU1Q9NWB6 273 aaPredicted RBP17.77■□□□□ 0.44
CIRBP-245ENST00000621399 ANGPTL3Q9Y5C1 460 aa17.77■□□□□ 0.44
CIRBP-245ENST00000621399 ANKRD12Q6UB98 2062 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 KCNE1BA0A087WTH5 132 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 SIX3O95343 332 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-245ENST00000621399 HBQ1P09105 142 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 CCNYL3P0C7X3 344 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 C1GALT1C1LP0DN25 315 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 EPB42P16452 691 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 VARSP26640 1264 aaKnown RBP17.76■□□□□ 0.43
CIRBP-245ENST00000621399 EEF1DP29692 281 aaKnown RBP17.76■□□□□ 0.43
CIRBP-245ENST00000621399 ATP1A2P50993 1020 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 PCBP2Q15366 365 aaKnown RBP eCLIP17.76■□□□□ 0.43
CIRBP-245ENST00000621399 SLCO4C1Q6ZQN7 724 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 CACNA2D3Q8IZS8 1091 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 ESX1Q8N693 406 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 CSNK1A1LQ8N752 337 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 TTC29Q8NA56 475 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-245ENST00000621399 SLC38A9Q8NBW4 561 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 THAP11Q96EK4 314 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 DPH1Q9BZG8 443 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 SYNPO2LQ9H987 977 aa17.76■□□□□ 0.43
CIRBP-245ENST00000621399 CHD6Q8TD26 2715 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 TRBC2A0A5B9 178 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 FITM1A5D6W6 292 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 LRRC14BA6NHZ5 514 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 A8MT66 165 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 STX16-NPEPL1H3BU86 382 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 STX16O14662 325 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 KLK10O43240 276 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 OR1F1O43749 312 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 LCMT2O60294 686 aaKnown RBP17.75■□□□□ 0.43
CIRBP-245ENST00000621399 KLK3P07288 261 aaPredicted RBP17.75■□□□□ 0.43
CIRBP-245ENST00000621399 CXCR2P25025 360 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 BCL6P41182 706 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 CLN3Q13286 438 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 COL9A2Q14055 689 aaPredicted RBP17.75■□□□□ 0.43
CIRBP-245ENST00000621399 MAP7Q14244 749 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 CCDC153Q494R4 210 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 XKR6Q5GH73 641 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 ATG9BQ674R7 924 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 METTL2BQ6P1Q9 378 aaKnown RBP17.75■□□□□ 0.43
CIRBP-245ENST00000621399 LRRC69Q6ZNQ3 347 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 IL22RA1Q8N6P7 574 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 MFSD9Q8NBP5 474 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 ZNF740Q8NDX6 193 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 NKD1Q969G9 470 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 SMC6Q96SB8 1091 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 IQCGQ9H095 443 aaKnown RBP17.75■□□□□ 0.43
CIRBP-245ENST00000621399 SPNS1Q9H2V7 528 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 ENAMQ9NRM1 1142 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 TXLNGQ9NUQ3 528 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 EMCNQ9ULC0 261 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 PADI1Q9ULC6 663 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 ZMIZ1Q9ULJ6 1067 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 SRPK3Q9UPE1 567 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 PCDHGA4Q9Y5G9 962 aa17.75■□□□□ 0.43
CIRBP-245ENST00000621399 SNRNP200O75643 2136 aaKnown RBP17.74■□□□□ 0.43
CIRBP-245ENST00000621399 APC2O95996 2303 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 HYKKA2RU49 373 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 MEN1O00255 615 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 TXNDC9O14530 226 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 EPORP19235 508 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 ALAS2P22557 587 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 ATP5F1P24539 256 aaPredicted RBP17.74■□□□□ 0.43
CIRBP-245ENST00000621399 PIK3CGP48736 1102 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 ARSFP54793 590 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 REEP5Q00765 189 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 IRF8Q02556 426 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 GPS2Q13227 327 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 DOC2AQ14183 400 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 SLBPQ14493 270 aaKnown RBP eCLIP17.74■□□□□ 0.43
CIRBP-245ENST00000621399 CASP8Q14790 479 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 RBBP5Q15291 538 aaKnown RBP17.74■□□□□ 0.43
CIRBP-245ENST00000621399 FAM214AQ32MH5 1076 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 RHBDD2Q6NTF9 364 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 TTLL10Q6ZVT0 673 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 BANPQ8N9N5 519 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 CCDC63Q8NA47 563 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 APOPT1Q96IL0 206 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 LRFN5Q96NI6 719 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 NLNQ9BYT8 704 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 EHD1Q9H4M9 534 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 CUTCQ9NTM9 273 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 GEMIN8Q9NWZ8 242 aaKnown RBP17.74■□□□□ 0.43
CIRBP-245ENST00000621399 DHCR7Q9UBM7 475 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms