RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 OR1L3Q8NH93 324 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 ZUFSPQ96AP4 578 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 TCTN2Q96GX1 697 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 FGF21Q9NSA1 209 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 TMEM184CQ9NVA4 438 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 RNF11Q9Y3C5 154 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 TNPO3Q9Y5L0 923 aaKnown RBP13.06□□□□□ -0.32
NEK3-210ENST00000620675 CCDC187A0A096LP49 1063 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 HMGB1P1B2RPK0 211 aaPredicted RBP13.06□□□□□ -0.32
NEK3-210ENST00000620675 TMEM150CB9EJG8 249 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 H3BMH7 237 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 P2RX6O15547 441 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 ZWINTO95229 277 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 CCNDBP1O95273 360 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 C1GALT1C1LP0DN25 315 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 CCR8P51685 355 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 SLBPQ14493 270 aaKnown RBP eCLIP13.06□□□□□ -0.32
NEK3-210ENST00000620675 LETMD1Q6P1Q0 360 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 GALNT15Q8N3T1 639 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 ZNF501Q96CX3 271 aaPredicted RBP13.06□□□□□ -0.32
NEK3-210ENST00000620675 CMKLR1Q99788 373 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 STRADBQ9C0K7 418 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 SPRTNQ9H040 489 aaPredicted RBP13.06□□□□□ -0.32
NEK3-210ENST00000620675 ZNF490Q9ULM2 529 aaPredicted RBP13.06□□□□□ -0.32
NEK3-210ENST00000620675 TMCO1Q9UM00 188 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 ANGPTL3Q9Y5C1 460 aa13.06□□□□□ -0.32
NEK3-210ENST00000620675 PLD2O14939 933 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 TRIM13O60858 407 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 CHRNGP07510 517 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 DNAJB13P59910 316 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 ERVPABLB-1P60509 514 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 REEP5Q00765 189 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 IRF8Q02556 426 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 TUBB3Q13509 450 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 RBBP7Q16576 425 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 TCHHL1Q5QJ38 904 aaPredicted RBP13.05□□□□□ -0.32
NEK3-210ENST00000620675 ATG9BQ674R7 924 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 RNF44Q7L0R7 432 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 VN1R4Q7Z5H5 301 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 KMT5CQ86Y97 462 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 MYLK4Q86YV6 388 aaPredicted RBP13.05□□□□□ -0.32
NEK3-210ENST00000620675 MCATQ8IVS2 390 aaKnown RBP13.05□□□□□ -0.32
NEK3-210ENST00000620675 LSMEM2Q8N112 164 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 CARFQ8N187 725 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 OR6Y1Q8NGX8 325 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 OR2A5Q96R48 311 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 SNX7Q9UNH6 387 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 B3GALT1Q9Y5Z6 326 aa13.05□□□□□ -0.32
NEK3-210ENST00000620675 MED19A0JLT2 244 aaPredicted RBP13.04□□□□□ -0.32
NEK3-210ENST00000620675 H0YGG7 62 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 CLGNO14967 610 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 MED26O95402 600 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 BGNP21810 368 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 VSX2P58304 361 aaPredicted RBP13.04□□□□□ -0.32
NEK3-210ENST00000620675 ARF3P61204 181 aaPredicted RBP13.04□□□□□ -0.32
NEK3-210ENST00000620675 CYP4F2P78329 520 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 HKDC1Q2TB90 917 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 FRMD7Q6ZUT3 714 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 VN1R5Q7Z5H4 357 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 SYVN1Q86TM6 617 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 NUDCD3Q8IVD9 361 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 CACTIN-AS1Q8N1I8 211 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 OR4F6Q8NGB9 312 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 PPP4R1Q8TF05 950 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 KCNA7Q96RP8 456 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 ZFYVE21Q9BQ24 234 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 C20orf27Q9GZN8 174 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 AICDAQ9GZX7 198 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 PELI2Q9HAT8 420 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 GPRC5BQ9NZH0 403 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 DSPP15924 2871 aaKnown RBP13.04□□□□□ -0.32
NEK3-210ENST00000620675 KCNE1BA0A087WTH5 132 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 C9orf172C9J069 976 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 ITM2AO43736 263 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 OR1F1O43749 312 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 LYPLA1O75608 230 aaPredicted RBP13.04□□□□□ -0.32
NEK3-210ENST00000620675 OR4F21O95013 312 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 FKBP9O95302 570 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 TBX6O95947 436 aaPredicted RBP13.04□□□□□ -0.32
NEK3-210ENST00000620675 EIF2S1P05198 315 aaKnown RBP13.04□□□□□ -0.32
NEK3-210ENST00000620675 JMJD7P0C870 316 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 ZNF28P17035 718 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 ARL1P40616 181 aaPredicted RBP13.04□□□□□ -0.32
NEK3-210ENST00000620675 CCNG1P51959 295 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 FOXA1P55317 472 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 PPP2R2AP63151 447 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 GABREP78334 506 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 MC2RQ01718 297 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 E2F2Q14209 437 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 CHI3L2Q15782 390 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 CPSF6Q16630 551 aaKnown RBP eCLIP13.04□□□□□ -0.32
NEK3-210ENST00000620675 HHATQ5VTY9 493 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 PWWP2BQ6NUJ5 590 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 SHISA5Q8N114 240 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 WDR36Q8NI36 951 aaKnown RBP13.04□□□□□ -0.32
NEK3-210ENST00000620675 CCDC126Q96EE4 140 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 WDR34Q96EX3 536 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 ACBD3Q9H3P7 528 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 ACTR8Q9H981 624 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 SLC39A1Q9NY26 324 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms