RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SLC16A5O15375 505 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 FDXRP22570 491 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 SLC26A3P40879 764 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 PAFAH1B1P43034 410 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 ARL4CP56559 192 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 CSNK1G2P78368 415 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 SP140Q13342 867 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 PDAP1Q13442 181 aaKnown RBP16.31■□□□□ 0.2
HMGN3-203ENST00000620514 NAE1Q13564 534 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 FASTKD3Q14CZ7 662 aaKnown RBP16.31■□□□□ 0.2
HMGN3-203ENST00000620514 ZXDCQ2QGD7 858 aaPredicted RBP16.31■□□□□ 0.2
HMGN3-203ENST00000620514 VN1R4Q7Z5H5 301 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 PALM2Q8IXS6 379 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 SHISA5Q8N114 240 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 LRRC39Q96DD0 335 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 MVB12AQ96EY5 273 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 SNF8Q96H20 258 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 KRT12Q99456 494 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 MACROD1Q9BQ69 325 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 MAP10Q9P2G4 905 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 IKZF3Q9UKT9 509 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 B3GNT3Q9Y2A9 372 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 VWA7Q9Y334 891 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 SNX24Q9Y343 169 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 CSAG2Q9Y5P2 127 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 PSAT1Q9Y617 370 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 DOCK10Q96BY6 2186 aa16.31■□□□□ 0.2
HMGN3-203ENST00000620514 FEZF1A0PJY2 475 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 EFCAB8A8MWE9 144 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 KLHL41O60662 606 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 IPO13O94829 963 aaKnown RBP16.3■□□□□ 0.2
HMGN3-203ENST00000620514 ACPPP15309 386 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 RPL21P46778 160 aaKnown RBP16.3■□□□□ 0.2
HMGN3-203ENST00000620514 EMP2P54851 167 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 IL2P60568 153 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 MAT1AQ00266 395 aaKnown RBP16.3■□□□□ 0.2
HMGN3-203ENST00000620514 PDIA2Q13087 525 aaKnown RBP16.3■□□□□ 0.2
HMGN3-203ENST00000620514 ATG9BQ674R7 924 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 FAAH2Q6GMR7 532 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 FAM45BPQ6NSW5 357 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 PRSS41Q7RTY9 318 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 C17orf64Q86WR6 236 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 ZADH2Q8N4Q0 377 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 FAM26EQ8N5C1 309 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 FBXO36Q8NEA4 188 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 FAM45AQ8TCE6 357 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 SNRNP40Q96DI7 357 aaKnown RBP16.3■□□□□ 0.2
HMGN3-203ENST00000620514 THOC3Q96J01 351 aaKnown RBP16.3■□□□□ 0.2
HMGN3-203ENST00000620514 SGPP1Q9BX95 441 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 DRC3Q9H069 523 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 ZNF160Q9HCG1 818 aa16.3■□□□□ 0.2
HMGN3-203ENST00000620514 IDSB3KWA1 339 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 TXNDC9O14530 226 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 MAP2K7O14733 419 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 PRPF4O43172 522 aaKnown RBP eCLIP16.29■□□□□ 0.2
HMGN3-203ENST00000620514 HPP00738 406 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 ANXA5P08758 320 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 CDH1P12830 882 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 HRH2P25021 359 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 BCL6P41182 706 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 EFNA3P52797 238 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 RPS15AP62244 130 aaKnown RBP16.29■□□□□ 0.2
HMGN3-203ENST00000620514 FRG1Q14331 258 aaKnown RBP16.29■□□□□ 0.2
HMGN3-203ENST00000620514 LCTLQ6UWM7 567 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 TMEM207Q6UWW9 146 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 CUZD1Q86UP6 607 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 ZC3H7AQ8IWR0 971 aaKnown RBP16.29■□□□□ 0.2
HMGN3-203ENST00000620514 CISD2Q8N5K1 135 aaKnown RBP16.29■□□□□ 0.2
HMGN3-203ENST00000620514 AMER2Q8N7J2 671 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 OR9A4Q8NGU2 314 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 TM9SF4Q92544 642 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 PYCR2Q96C36 320 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 LHPPQ9H008 270 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 ILKAPQ9H0C8 392 aaPredicted RBP16.29■□□□□ 0.2
HMGN3-203ENST00000620514 PCBD2Q9H0N5 130 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 MKKSQ9NPJ1 570 aaPredicted RBP16.29■□□□□ 0.2
HMGN3-203ENST00000620514 ARL15Q9NXU5 204 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 CORO1CQ9ULV4 474 aaPredicted RBP16.29■□□□□ 0.2
HMGN3-203ENST00000620514 LRRK2Q5S007 2527 aa16.29■□□□□ 0.2
HMGN3-203ENST00000620514 KCNE1BA0A087WTH5 132 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 TCP11X1B4DZS4 312 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 E7ESA3 106 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 LCMT2O60294 686 aaKnown RBP16.28■□□□□ 0.2
HMGN3-203ENST00000620514 JRKO75564 520 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 HIST1H2AGP0C0S8 130 aaPredicted RBP16.28■□□□□ 0.2
HMGN3-203ENST00000620514 COX6A1P12074 109 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 NPPBP16860 134 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 HIST1H2ADP20671 130 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 SAT1P21673 171 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 EEF1A2Q05639 463 aaKnown RBP16.28■□□□□ 0.2
HMGN3-203ENST00000620514 MGAT5Q09328 741 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 MRPL49Q13405 166 aaKnown RBP16.28■□□□□ 0.2
HMGN3-203ENST00000620514 FAM53BQ14153 422 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 NDUFA9Q16795 377 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 AGAP7PQ5VUJ5 663 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 IRAK1BP1Q5VVH5 260 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 Q6ZS92 163 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 IQCKQ8N0W5 287 aa16.28■□□□□ 0.2
HMGN3-203ENST00000620514 C17orf53Q8N3J3 647 aaPredicted RBP16.28■□□□□ 0.2
HMGN3-203ENST00000620514 VPS50Q96JG6 964 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms